CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh3_kg.1__236__4585_0_CCPA2104.b1_CCOZ_CCPA_CCPB_CCPC_EXTA
(
Heterobasidion annosum
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
fgenesh3_kg.1__236__4585_0_CCPA2104.b1_CCOZ_CCPA_CCPB_CCPC_EXTA
T230864_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh3_kg.1__236__4585_0_CCPA2104.b1_CCOZ_CCPA_CCPB_CCPC_EXTA
Homeodomain
148
184
NLHNPYPSPDIKAQLAQAHGLSPKAIGTWFKQVRQEI
Links
Other
Homeodomain
family TFs
Other
Heterobasidion annosum
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HETIRDRAFT_166553
Heterobasidion irregulare
HETIRDRAFT_166553
N
0.850
TCNE_0000507501
Toxocara canis
TCNE_0000507501
N
0.679
SVUK_0002108701
Strongylus vulgaris
SVUK_0002108701
N
0.670
YQE_03710
Dendroctonus ponderosae
YQE_03710
I
0.640
BTMF_0000534901
Brugia timori
BTMF_0000534901
N
0.640
Bm522
Brugia malayi
Bm522
N
0.625
WBGene00242653
Onchocerca volvulus
WBGene00242653
N
0.625
SNAPOd2T00005340001
Oikopleura dioica
SNAPOd2T00005340001
N
0.622
PEQ_0000660801
Parascaris equorum
PEQ_0000660801
I
0.621
maker-nMf.1.1.scaf08801-snap-gene-0.8
Meloidogyne floridensis
maker-nMf.1.1.scaf08801-snap-gene-0.8
N
0.602