CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
MDOA002143
(
Musca domestica
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
MDOA002143
T232549_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Pbx1
M09213_2.00
Mus musculus
TGABTGRCRGV
BCYGYCAVTCA
Misc
Kulakovskiy et al.(2013)
PBX1_MOUSE.H11MO.0.A
0.750
0.925
exd
M06487_2.00
Drosophila melanogaster
YRTCAAAN
NTTTGAYR
B1H
Mathelier et al.(2014)
MA0222.1
0.306
1.000
exd
M06243_2.00
Drosophila melanogaster
YRTCAAAN
NTTTGAYR
B1H
Zhu et al.(2011)
Exd_Cell_FBgn0000611
0.306
1.000
exd
M06244_2.00
Drosophila melanogaster
NWRNWYNAAA
TTTNRWNYWN
B1H
Zhu et al.(2011)
exd_FlyReg_FBgn0000611
0.306
1.000
exd
M06245_2.00
Drosophila melanogaster
NDTGAYRW
WYRTCAHN
B1H
Zhu et al.(2011)
exd_SOLEXA_2_FBgn0000611
0.306
1.000
exd
M06246_2.00
Drosophila melanogaster
NNDTGAYR
YRTCAHNN
B1H
Zhu et al.(2011)
Exd_SOLEXA_FBgn0000611
0.306
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MDOA002143-PA
Homeodomain
239
281
RRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGIT
Links
Other
Homeodomain
family TFs
Other
Musca domestica
TFs
89 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL012877
Aedes aegypti
AAEL012877
I
0.306
ANCCEY_11361
Ancylostoma ceylanicum
ANCCEY_11361
I
0.688
ANCDUO_01775
Ancylostoma duodenale
ANCDUO_01775
I
0.661
ACOC_0000393801
Angiostrongylus costaricensis
ACOC_0000393801
I
0.712
ENSACAG00000003721
Anolis carolinensis
ENSACAG00000003721
I
0.766
AALB007458
Anopheles albimanus
AALB007458
I
0.306
AARA008605
Anopheles arabiensis
AARA008605
I
0.306
AATE002772
Anopheles atroparvus
AATE002772
I
0.306
ACHR009872
Anopheles christyi
ACHR009872
I
0.306
ACOM038719
Anopheles coluzzii
ACOM038719
I
0.306
ACUA007055
Anopheles culicifacies
ACUA007055
I
0.306
ADAC002586
Anopheles darlingi
ADAC002586
I
0.306
ADIR011713
Anopheles dirus
ADIR011713
I
0.306
AEPI008243
Anopheles epiroticus
AEPI008243
I
0.795
AFAF002967
Anopheles farauti
AFAF002967
I
0.306
AFUN000505
Anopheles funestus
AFUN000505
I
0.306
exd
Anopheles gambiae
AGAP004696
I
0.306
AMAM017776
Anopheles maculatus
AMAM017776
I
0.306
AMEC011684
Anopheles melas
AMEC011684
I
0.306
AMEM004235
Anopheles merus
AMEM004235
I
0.306
AMIN007491
Anopheles minimus
AMIN007491
I
0.306
AQUA011882
Anopheles quadriannulatus
AQUA011882
I
0.306
ASIS010434
Anopheles sinensis
ASIS010434
I
0.306
ASTEI08171
Anopheles stephensi
ASTEI08171
I
0.306
GB51904
Apis mellifera
GB51904
I
0.306
Brh_R010078
Buceros rhinoceros
Brh_R010078
I
0.795
Cflo_02624--XP_392297.3_APIME
Camponotus floridanus
Cflo_02624--XP_392297.3_APIME
I
0.306
CpipJ_CPIJ008039
Culex pipiens
CpipJ_CPIJ008039
I
0.306
CPIJ008039
Culex quinquefasciatus
CPIJ008039
I
0.306
CABZ01017151.1
Danio rerio
ENSDARG00000104156
I
0.750
DAPPUDRAFT_347218
Daphnia pulex
DAPPUDRAFT_347218
I
0.306
YQE_01649
Dendroctonus ponderosae
YQE_01649
I
0.306
GF20172
Drosophila ananassae
FBgn0097179
I
0.306
GG17938
Drosophila erecta
FBgn0110158
I
0.306
GH17639
Drosophila grimshawi
FBgn0125109
I
0.306
exd
Drosophila melanogaster
FBgn0000611
D
0.306
GI16078
Drosophila mojavensis
FBgn0138827
I
0.306
GL10055
Drosophila persimilis
FBgn0147665
I
0.306
exd
Drosophila pseudoobscura
FBgn0081406
I
0.306
GM11678
Drosophila sechellia
FBgn0166621
I
0.306
GD17261
Drosophila simulans
FBgn0188823
I
0.306
GJ15726
Drosophila virilis
FBgn0202914
I
0.306
GJ15917
Drosophila virilis
FBgn0203104
I
0.306
GK20113
Drosophila willistoni
FBgn0222110
I
0.306
GE17244
Drosophila yakuba
FBgn0234722
I
0.306
PBX1
Echinops telfairi
ENSETEG00000019309
I
0.648
D915_05491
Fasciola hepatica
D915_05491
I
0.797
ENSGMOG00000006428
Gadus morhua
ENSGMOG00000006428
I
0.748
Hsal_09224--XP_392297.3_APIME
Harpegnathos saltator
Hsal_09224--XP_392297.3_APIME
I
0.306
HMEL015430
Heliconius melpomene
HMEL015430
I
0.306
PBX1
Homo sapiens
ENSG00000185630
D
0.750
HmN_000400100
Hymenolepis microstoma
HmN_000400100
I
0.665
ENSSTOG00000013679
Ictidomys tridecemlineatus
ENSSTOG00000013679
I
0.799
ENSLACG00000016442
Latimeria chalumnae
ENSLACG00000016442
I
0.750
ENSLOCG00000006841
Lepisosteus oculatus
ENSLOCG00000006841
I
0.750
LDEC006593
Leptinotarsa decemlineata
LDEC006593
I
0.748
Lus10025232.g
Linum usitatissimum
Lus10025232.g
N
0.621
LCUP014957
Lucilia cuprina
LCUP014957
I
0.306
ENSMEUG00000006330
Macropus eugenii
ENSMEUG00000006330
I
0.801
ENSMEUG00000002971
Macropus eugenii
ENSMEUG00000002971
I
0.795
MESCA000707
Megaselia scalaris
MESCA000707
I
0.867
genemark-nMf.1.1.scaf05885-processed-gene-0.2
Meloidogyne floridensis
genemark-nMf.1.1.scaf05885-processed-gene-0.2
I
0.611
MhA1_Contig138.frz3.gene24
Meloidogyne hapla
MhA1_Contig138.frz3.gene24
I
0.727
MDOA011174
Musca domestica
MDOA011174
I
0.306
MDOA004688
Musca domestica
MDOA004688
I
0.306
Tgif1
Mus musculus
ENSMUSG00000047407
D
0.602
Pbx1
Mus musculus
ENSMUSG00000052534
D
0.750
fgenesh1_pg.C_scaffold_1001003
Mycosphaerella fijiensis
fgenesh1_pg.C_scaffold_1001003
I
0.609
Myotis_brandtii_MIMI_R196_10004074
Myotis brandtii
Myotis_brandtii_MIMI_R196_10004074
I
0.675
Myotis_brandtii_MIMI_L668_10004071
Myotis brandtii
Myotis_brandtii_MIMI_L668_10004071
I
0.675
NV11620
Nasonia vitripennis
NV11620
I
0.306
UCRNP2_7717
Neofusicoccum parvum
UCRNP2_7717
I
0.599
SNAPOd2T00009387001
Oikopleura dioica
SNAPOd2T00009387001
I
0.600
Ogr15448
Ophisaurus gracilis
Ogr15448
I
0.748
PBX4
Oryctolagus cuniculus
ENSOCUG00000029208
I
0.743
ORUFI07G17770
Oryza rufipogon
ORUFI07G17770
N
0.636
PBX1
Oryzias latipes
ENSORLG00000016702
I
0.750
PHUM213170
Pediculus humanus
PHUM213170
I
0.306
PPAI000859
Phlebotomus papatasi
PPAI000859
I
0.867
PXEA_0001880101
Protopolystoma xenopodis
PXEA_0001880101
I
0.680
MYCFIDRAFT_76128
Pseudocercospora fijiensis
MYCFIDRAFT_76128
I
0.609
A_00975
Schistosoma haematobium
A_00975
I
0.746
SINV21415
Solenopsis invicta
SINV21415
I
0.306
SVUK_0000462001
Strongylus vulgaris
SVUK_0000462001
I
0.754
SVUK_0001050601
Strongylus vulgaris
SVUK_0001050601
I
0.600
TELCIR_02026
Teladorsagia circumcincta
TELCIR_02026
I
0.694
TC011311
Tribolium castaneum
TC011311
I
0.306
PBX3
Tupaia belangeri
ENSTBEG00000016855
I
0.766
L798_00408
Zootermopsis nevadensis
L798_00408
I
0.306