CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPLIN_001377400
(
Globodera pallida
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
GPLIN_001377400
T234072_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPLIN_001377400
Homeodomain
175
216
VQQHGNNMYPSREQKERLAAQLCTNYEKVNKLFANYRRRQHK
Links
Other
Homeodomain
family TFs
Other
Globodera pallida
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc00734
Meloidogyne incognita
Minc00734
N
0.747
MhA1_Contig657.frz3.gene1
Meloidogyne hapla
MhA1_Contig657.frz3.gene1
N
0.743
L596_g21727
Steinernema carpocapsae
L596_g21727
I
0.685
HmN_000921700
Hymenolepis microstoma
HmN_000921700
I
0.671
HmN_000922600
Hymenolepis microstoma
HmN_000922600
I
0.671
TsM_000760900
Taenia solium
TsM_000760900
I
0.671
TTAC_0000670801
Hydatigera taeniaeformis
TTAC_0000670801
I
0.671
HNAJ_0001179801
Hymenolepis nana
HNAJ_0001179801
I
0.670
D915_00592
Fasciola hepatica
D915_00592
I
0.666
Aan_R003869
Calypte anna
Aan_R003869
I
0.663
Aqu1.225495
Amphimedon queenslandica
Aqu1.225495
I
0.662
IRX3
Dasypus novemcinctus
ENSDNOG00000012985
I
0.662
ENSMEUG00000004557
Macropus eugenii
ENSMEUG00000004557
I
0.662
Brh_R000015
Buceros rhinoceros
Brh_R000015
I
0.662
PXEA_0002454601
Protopolystoma xenopodis
PXEA_0002454601
I
0.660
ATEG_05203
Aspergillus terreus
CADATEAG00005116
I
0.648
ENSPTRG00000039451
Pan troglodytes
ENSPTRG00000039451
I
0.643
ENSSSCG00000009724
Sus scrofa
ENSSSCG00000009724
I
0.643
L892_g27282
Steinernema scapterisci
L892_g27282
I
0.641
estExt_fgenesh2_pg.C_2210037
Branchiostoma floridae
estExt_fgenesh2_pg.C_2210037
I
0.640
Ocbimv22006483m.g
Octopus bimaculoides
Ocbimv22006483m.g
I
0.640
ENSCAFG00000010422
Canis familiaris
ENSCAFG00000010422
I
0.639
ENSMPUG00000007638
Mustela putorius furo
ENSMPUG00000007638
I
0.639
ENSOANG00000029378
Ornithorhynchus anatinus
ENSOANG00000029378
I
0.639
Irx3
Rattus norvegicus
ENSRNOG00000011533
I
0.639
SMAR007687
Strigamia maritima
SMAR007687
I
0.639
Myotis_brandtii_Irx1_10035798
Myotis brandtii
Myotis_brandtii_Irx1_10035798
I
0.639
Ogr18478
Ophisaurus gracilis
Ogr18478
I
0.639
L893_g31416
Steinernema glaseri
L893_g31416
I
0.639
SMTD_0002243001
Schistosoma mattheei
SMTD_0002243001
I
0.639
CGI_10011802
Crassostrea gigas
CGI_10011802
I
0.636
ENSAPLG00000010674
Anas platyrhynchos
ENSAPLG00000010674
I
0.632
ENSCSAG00000011743
Chlorocebus sabaeus
ENSCSAG00000011743
I
0.632
ENSOARG00000016067
Ovis aries
ENSOARG00000016067
I
0.632
MKX
Procavia capensis
ENSPCAG00000014719
I
0.632
MKX
Tupaia belangeri
ENSTBEG00000008150
I
0.632
HelroG171177
Helobdella robusta
HelroG171177
I
0.632
Afo_R009272
Aptenodytes forsteri
Afo_R009272
I
0.632
Alligator_sinensis_CCG010381.1
Alligator sinensis
Alligator_sinensis_CCG010381.1
I
0.632
Brh_R010356
Buceros rhinoceros
Brh_R010356
I
0.632
Gfo_R014865
Geospiza fortis
Gfo_R014865
I
0.632
Tal_R007088
Tyto alba
Tal_R007088
I
0.632
L898_g17064
Steinernema monticolum
L898_g17064
I
0.628
SMAR002833
Strigamia maritima
SMAR002833
I
0.626
HCOI01137300
Haemonchus contortus
HCOI01137300
N
0.626
NBR_0001052001
Nippostrongylus brasiliensis
NBR_0001052001
N
0.626
HelroG153600
Helobdella robusta
HelroG153600
I
0.625
TASK_0000658901
Taenia asiatica
TASK_0000658901
I
0.625
DICVIV_07073
Dictyocaulus viviparus
DICVIV_07073
N
0.614
AGAP009986
Anopheles gambiae
AGAP009986
D
0.605
AARA003790
Anopheles arabiensis
AARA003790
I
0.605
AMAM020176
Anopheles maculatus
AMAM020176
I
0.605
HMEL002096
Heliconius melpomene
HMEL002096
I
0.603
D915_04768
Fasciola hepatica
D915_04768
I
0.599
ECPE_0000388901
Echinostoma caproni
ECPE_0000388901
I
0.599