SVUK_0001050601 (Strongylus vulgaris)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SVUK_0001050601 T236606_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Pbx1
M09213_2.00 		Mus musculus
TGABTGRCRGV
BCYGYCAVTCA		 Misc
Kulakovskiy et al.(2013)
PBX1_MOUSE.H11MO.0.A 		0.644 0.479
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SVUK_0001050601-mRNA-1 Homeodomain 60 110

Links

Other Homeodomain family TFs
Other Strongylus vulgaris TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCDUO_01775 Ancylostoma duodenale ANCDUO_01775 I 0.727
TELCIR_02026 Teladorsagia circumcincta TELCIR_02026 I 0.699
ACOC_0000393801 Angiostrongylus costaricensis ACOC_0000393801 I 0.683
ANCCEY_11361 Ancylostoma ceylanicum ANCCEY_11361 I 0.680
A_00975 Schistosoma haematobium A_00975 I 0.678
ENSACAG00000003721 Anolis carolinensis ENSACAG00000003721 I 0.644
CABZ01017151.1 Danio rerio ENSDARG00000104156 I 0.644
PBX1 Homo sapiens ENSG00000185630 D 0.644
ENSGMOG00000006428 Gadus morhua ENSGMOG00000006428 I 0.644
ENSLACG00000016442 Latimeria chalumnae ENSLACG00000016442 I 0.644
ENSLOCG00000006841 Lepisosteus oculatus ENSLOCG00000006841 I 0.644
ENSMEUG00000006330 Macropus eugenii ENSMEUG00000006330 I 0.644
Pbx1 Mus musculus ENSMUSG00000052534 D 0.644
PBX1 Oryzias latipes ENSORLG00000016702 I 0.644
ENSSTOG00000013679 Ictidomys tridecemlineatus ENSSTOG00000013679 I 0.644
PBX3 Tupaia belangeri ENSTBEG00000016855 I 0.644
Ogr15448 Ophisaurus gracilis Ogr15448 I 0.644
D915_05491 Fasciola hepatica D915_05491 I 0.644
ENSMEUG00000002971 Macropus eugenii ENSMEUG00000002971 I 0.638
PBX4 Oryctolagus cuniculus ENSOCUG00000029208 I 0.638
Brh_R010078 Buceros rhinoceros Brh_R010078 I 0.638
SVUK_0000462001 Strongylus vulgaris SVUK_0000462001 I 0.633
MESCA000707 Megaselia scalaris MESCA000707 I 0.600
LDEC006593 Leptinotarsa decemlineata LDEC006593 I 0.600
MDOA002143 Musca domestica MDOA002143 I 0.600
PPAI000859 Phlebotomus papatasi PPAI000859 I 0.600