TRE_0001559401 (Trichobilharzia regenti)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 TRE_0001559401 T237011_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARGFX
M05369_2.00 		Homo sapiens
NYTAATTARH
DYTAATTARN		 SELEX
Yin et al.(2017)
ARGFX_eDBD_HT-SELEX_1 		0.605 0.281
ARGFX
M05370_2.00 		Homo sapiens
HTAATYTAATTAR
YTAATTARATTAD		 SELEX
Yin et al.(2017)
ARGFX_eDBD_HT-SELEX_2 		0.605 0.281
ARGFX
M05371_2.00 		Homo sapiens
NYTAATTAGH
DCTAATTARN		 SELEX
Yin et al.(2017)
ARGFX_eDBD_Methyl-HT-SELEX_1 		0.605 0.281
ARGFX
M05372_2.00 		Homo sapiens
HTAATYTAATTAR
YTAATTARATTAD		 SELEX
Yin et al.(2017)
ARGFX_eDBD_Methyl-HT-SELEX_2 		0.605 0.281
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TRE_0001559401-mRNA-1 Homeodomain 603 659

Links

Other Homeodomain family TFs
Other Trichobilharzia regenti TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Smp_171380 Schistosoma mansoni Smp_171380 I 0.865
SMTD_0002261301 Schistosoma mattheei SMTD_0002261301 I 0.865
SROB_0002221601 Schistosoma rodhaini SROB_0002221601 I 0.865
PXEA_0000230101 Protopolystoma xenopodis PXEA_0000230101 I 0.826
HelroG138586 Helobdella robusta HelroG138586 N 0.814
EFV48379 Trichinella spiralis EFV48379 N 0.803
D915_02122 Fasciola hepatica D915_02122 N 0.795
CGOC_0000645001 Cylicostephanus goldi CGOC_0000645001 I 0.793
TELCIR_21719 Teladorsagia circumcincta TELCIR_21719 I 0.793
EEL_0000436201 Elaeophora elaphi EEL_0000436201 I 0.791
MhA1_Contig726.frz3.gene2 Meloidogyne hapla MhA1_Contig726.frz3.gene2 I 0.698
ARGFX Oryctolagus cuniculus ENSOCUG00000008795 I 0.693
ARGFX Bos taurus ENSBTAG00000002273 I 0.617
ARGFX Callithrix jacchus ENSCJAG00000008507 I 0.617
ARGFX Macaca mulatta ENSMMUG00000016395 I 0.617
ENSOARG00000020026 Ovis aries ENSOARG00000020026 I 0.617
ARGFX Otolemur garnettii ENSOGAG00000002406 I 0.617
ENSPANG00000009686 Papio anubis ENSPANG00000009686 I 0.617
ENSPPYG00000008158 Pongo abelii ENSPPYG00000008158 I 0.617
ENSSSCG00000011886 Sus scrofa ENSSSCG00000011886 I 0.617
ARGFX Tupaia belangeri ENSTBEG00000015401 I 0.617
ENSMMUP00000021529 Macaca fascicularis ENSMMUP00000021529 I 0.617
ENSP00000335578-D1 Bos grunniens ENSP00000335578-D1 I 0.617
ENSLAFG00000028670 Loxodonta africana ENSLAFG00000028670 I 0.609
ENSCPOG00000006393 Cavia porcellus ENSCPOG00000006393 I 0.605
ARGFX Homo sapiens ENSG00000186103 D 0.605
ARGFX Gorilla gorilla ENSGGOG00000005362 I 0.605
ENSNLEG00000013255 Nomascus leucogenys ENSNLEG00000013255 I 0.605
ENSPPYG00000013497 Pongo abelii ENSPPYG00000013497 I 0.605
ARGFX Pan troglodytes ENSPTRG00000015277 I 0.605