Bo6g008100 (Brassica oleracea)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 Bo6g008100 T239806_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSFB4
M06936_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFB4_col_a 		0.587 0.966
HSFB2B
M06945_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_col_a 		0.466 0.805
HSFB2B
M06946_2.00 		Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSF7_colamp_a 		0.466 0.805
HSFA4A
M06947_2.00 		Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN		 Dap-seq
OMalley et al.(2016)
HSF21_col_a 		0.459 0.678
HSFB2A
M00869_2.00 		Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN		 PBM
Franco-Zorrilla et al.(2014)
HSFB2A 		0.452 0.736
HSFB2A
M06952_2.00 		Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF6_col_a 		0.452 0.736
HSFC1
M00868_2.00 		Arabidopsis thaliana
NDTCBNNN
NNNVGAHN		 PBM
Franco-Zorrilla et al.(2014)
HSFC1 		0.435 0.655
HSFC1
M06943_2.00 		Arabidopsis thaliana
GAASNTTCTAG
CTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFC1_col_a 		0.435 0.655
HSFC1
M06944_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAANVW
WBNTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a 		0.435 0.655
HSFA1E
M06939_2.00 		Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_col_a 		0.424 0.678
HSFA1E
M06940_2.00 		Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a 		0.424 0.678
HSFA6B
M06941_2.00 		Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a 		0.416 0.724
HSFA6B
M06942_2.00 		Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY		 Dap-seq
OMalley et al.(2016)
HSFA6B_col 		0.416 0.724
HSFB3
M06937_2.00 		Arabidopsis thaliana
RRAANMWTCTAGAAV
BTTCTAGAWKNTTYY		 Dap-seq
OMalley et al.(2016)
HSFB3_col_a 		0.412 0.655
HSFB3
M06938_2.00 		Arabidopsis thaliana
AABSTTCTAGAAN
NTTCTAGAASVTT		 Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a 		0.412 0.655
HSFA6A
M06950_2.00 		Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_col_a 		0.410 0.667
HSFA6A
M06951_2.00 		Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC		 Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a 		0.410 0.667
HSFA1B
M06948_2.00 		Arabidopsis thaliana
GAANNTTCTAGA
TCTAGAANNTTC		 Dap-seq
OMalley et al.(2016)
HSF3_col_a 		0.403 0.678
HSFA1B
M06949_2.00 		Arabidopsis thaliana
TTCYRG
CYRGAA		 Dap-seq
OMalley et al.(2016)
HSF3_colamp_a 		0.403 0.678
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g008100.1 HSF 35 125

Links

Other HSF family TFs
Other Brassica oleracea TFs

1445 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LBD13 Arabidopsis thaliana AT2G30340 D
AMTR_s00007p00227160 Amborella trichopoda AMTR_s00007p00227160 I
LBD15 Arabidopsis thaliana AT2G40470 I
BGIOSGA004719 Oryza indica BGIOSGA004719 I
BGIOSGA013249 Oryza indica BGIOSGA013249 I
BGIOSGA018747 Oryza indica BGIOSGA018747 I
Bo3g034980 Brassica oleracea Bo3g034980 I
Bo4g012620 Brassica oleracea Bo4g012620 I
Bo4g059520 Brassica oleracea Bo4g059520 I
Bo4g172950 Brassica oleracea Bo4g172950 I
Bo4g190140 Brassica oleracea Bo4g190140 I
Bo4g190210 Brassica oleracea Bo4g190210 I
Bra000188 Brassica rapa Bra000188 I
Bra004572 Brassica rapa Bra004572 I
Bra016992 Brassica rapa Bra016992 I
Bra018320 Brassica rapa Bra018320 I
Bra021627 Brassica rapa Bra021627 I
BRADI2G34520 Brachypodium distachyon BRADI2G34520 I
BRADI2G53690 Brachypodium distachyon BRADI2G53690 I
F775_52636 Aegilops tauschii F775_52636 I
LBD13 Arabidopsis lyrata fgenesh2_kg.4__1005__AT2G30340.1 I
LBD15 Arabidopsis lyrata fgenesh2_kg.4__2164__AT2G40470.1 I
GLYMA02G40080 Glycine max GLYMA02G40080 I
GLYMA04G39830 Glycine max GLYMA04G39830 I
GLYMA06G15050 Glycine max GLYMA06G15050 I
GLYMA14G38280 Glycine max GLYMA14G38280 I
GRMZM2G025989 Zea mays GRMZM2G025989 I
GRMZM2G079185 Zea mays GRMZM2G079185 I
GRMZM2G092517 Zea mays GRMZM2G092517 I
GRMZM2G447176 Zea mays GRMZM2G447176 I
GRMZM5G868471 Zea mays GRMZM5G868471 I
GSMUA_Achr11G08330_001 Musa acuminata GSMUA_Achr11G08330_001 I
GSMUA_Achr5G07460_001 Musa acuminata GSMUA_Achr5G07460_001 I
GSMUA_Achr7G22200_001 Musa acuminata GSMUA_Achr7G22200_001 I
GSMUA_AchrUn_randomG14060_001 Musa acuminata GSMUA_AchrUn_randomG14060_001 I
LPERR01G30700 Leersia perrieri LPERR01G30700 I
LPERR03G23450 Leersia perrieri LPERR03G23450 I
LPERR05G04040 Leersia perrieri LPERR05G04040 I
MLOC_16076 Hordeum vulgare MLOC_16076 I
MLOC_5148 Hordeum vulgare MLOC_5148 I
MLOC_56075 Hordeum vulgare MLOC_56075 I
MTR_3g094690 Medicago truncatula MTR_3g094690 I
MTR_5g075020 Medicago truncatula MTR_5g075020 I
MTR_5g083960 Medicago truncatula MTR_5g083960 I
OB01G44400 Oryza brachyantha OB01G44400 I
OB05G14280 Oryza brachyantha OB05G14280 I
OBART01G35680 Oryza barthii OBART01G35680 I
OBART03G28270 Oryza barthii OBART03G28270 I
OBART05G04570 Oryza barthii OBART05G04570 I
OGLUM01G39690 Oryza glumaepatula OGLUM01G39690 I
OGLUM04G05130 Oryza glumaepatula OGLUM04G05130 I
OGLUM05G04450 Oryza glumaepatula OGLUM05G04450 I
OLONG_000658 Oryza longistaminata OLONG_000658 I
OLONG_007328 Oryza longistaminata OLONG_007328 I
OMERI01G32750 Oryza meridionalis OMERI01G32750 I
OMERI03G24920 Oryza meridionalis OMERI03G24920 I
OMERI05G04500 Oryza meridionalis OMERI05G04500 I
ONIVA01G40640 Oryza nivara ONIVA01G40640 I
ONIVA03G29300 Oryza nivara ONIVA03G29300 I
ONIVA05G04920 Oryza nivara ONIVA05G04920 I
OPUNC01G34540 Oryza punctata OPUNC01G34540 I
OPUNC03G25820 Oryza punctata OPUNC03G25820 I
ORGLA01G0294900 Oryza glaberrima ORGLA01G0294900 I
ORGLA05G0042200 Oryza glaberrima ORGLA05G0042200 I
ORUFI01G39050 Oryza rufipogon ORUFI01G39050 I
ORUFI01G46340 Oryza rufipogon ORUFI01G46340 I
ORUFI03G29410 Oryza rufipogon ORUFI03G29410 I
ORUFI05G04770 Oryza rufipogon ORUFI05G04770 I
OS01G0825000 Oryza sativa OS01G0825000 I
OS05G0165450 Oryza sativa OS05G0165450 I
PGSC0003DMG400008649 Solanum tuberosum PGSC0003DMG400008649 I
PGSC0003DMG400020562 Solanum tuberosum PGSC0003DMG400020562 I
PGSC0003DMG400021204 Solanum tuberosum PGSC0003DMG400021204 I
PGSC0003DMG400023939 Solanum tuberosum PGSC0003DMG400023939 I
PGSC0003DMG400029080 Solanum tuberosum PGSC0003DMG400029080 I
PGSC0003DMG400030456 Solanum tuberosum PGSC0003DMG400030456 I
PGSC0003DMG400030461 Solanum tuberosum PGSC0003DMG400030461 I
POPTR_0008s07280 Populus trichocarpa POPTR_0008s07280 I
POPTR_0009s08060 Populus trichocarpa POPTR_0009s08060 I
POPTR_0013s08040 Populus trichocarpa POPTR_0013s08040 I
POPTR_0013s15220 Populus trichocarpa POPTR_0013s15220 I
POPTR_0019s14790 Populus trichocarpa POPTR_0019s14790 I
PRUPE_ppa011757mg Prunus persica PRUPE_ppa011757mg I
PRUPE_ppa012253mg Prunus persica PRUPE_ppa012253mg I
PRUPE_ppa012504mg Prunus persica PRUPE_ppa012504mg I
PRUPE_ppa019397mg Prunus persica PRUPE_ppa019397mg I
Sb01g012810 Sorghum bicolor Sb01g012810 I
Sb03g038410 Sorghum bicolor Sb03g038410 I
Sb08g000575 Sorghum bicolor Sb08g000575 I
Sb09g004940 Sorghum bicolor Sb09g004940 I
SELMODRAFT_26920 Selaginella moellendorffii SELMODRAFT_26920 I
SELMODRAFT_37169 Selaginella moellendorffii SELMODRAFT_37169 I
Si004575m.g Setaria italica Si004575m.g I
Si012018m.g Setaria italica Si012018m.g I
Si026864m.g Setaria italica Si026864m.g I
Si037583m.g Setaria italica Si037583m.g I
Solyc02g069440.2 Solanum lycopersicum Solyc02g069440.2 I
Solyc06g007390.2 Solanum lycopersicum Solyc06g007390.2 I
Solyc06g050430.2 Solanum lycopersicum Solyc06g050430.2 I
Solyc06g050950.2 Solanum lycopersicum Solyc06g050950.2 I
Solyc06g082310.2 Solanum lycopersicum Solyc06g082310.2 I
Solyc06g082430.1 Solanum lycopersicum Solyc06g082430.1 I
Solyc11g045530.1 Solanum lycopersicum Solyc11g045530.1 I
TCM_042262 Theobroma cacao TCM_042262 I
TCM_042447 Theobroma cacao TCM_042447 I
TCM_045438 Theobroma cacao TCM_045438 I
Traes_1AS_43FB6A3CF Triticum aestivum Traes_1AS_43FB6A3CF I
Traes_1BS_8F922CA93 Triticum aestivum Traes_1BS_8F922CA93 I
Traes_1DS_BB8508CC6 Triticum aestivum Traes_1DS_BB8508CC6 I
TRAES3BF078900060CFD_g Triticum aestivum TRAES3BF078900060CFD_g I
TRIUR3_11082 Triticum urartu TRIUR3_11082 I
TRIUR3_18328 Triticum urartu TRIUR3_18328 I
TRIUR3_34193 Triticum urartu TRIUR3_34193 I
LBD13 Vitis vinifera VIT_06s0004g07790 I
LBD15 Vitis vinifera VIT_13s0067g02380 I
LBD3 Vitis vinifera VIT_19s0027g01120 I
Ca_04126 Cicer arietinum Ca_04126 I
Ca_12420 Cicer arietinum Ca_12420 I
Ca_12450 Cicer arietinum Ca_12450 I
Ca_15642 Cicer arietinum Ca_15642 I
Cla007391 Citrullus lanatus Cla007391 I
Cla009336 Citrullus lanatus Cla009336 I
Cla013678 Citrullus lanatus Cla013678 I
Pm000277 Prunus mume Pm000277 I
Pm011040 Prunus mume Pm011040 I
Pm018982 Prunus mume Pm018982 I
29729.m002278 Ricinus communis 29729.m002278 I
29729.m002335 Ricinus communis 29729.m002335 I
29957.m001411 Ricinus communis 29957.m001411 I
cassava15554.m1 Manihot esculenta cassava15554.m1 I
cassava20471.m1 Manihot esculenta cassava20471.m1 I
cassava20848.m1 Manihot esculenta cassava20848.m1 I
cassava20865.m1 Manihot esculenta cassava20865.m1 I
cassava27818.m1 Manihot esculenta cassava27818.m1 I
cassava30732.valid.m1 Manihot esculenta cassava30732.valid.m1 I
cassava31953.m1 Manihot esculenta cassava31953.m1 I
Cucsa.118370 Cucumis sativus Cucsa.118370 I
Cucsa.144080 Cucumis sativus Cucsa.144080 I
Cucsa.239660 Cucumis sativus Cucsa.239660 I
Cucsa.326100 Cucumis sativus Cucsa.326100 I
gw1.156.75.1 Physcomitrella patens gw1.156.75.1 I
gw1.9.232.1 Physcomitrella patens gw1.9.232.1 I
mgf011471m Mimulus guttatus mgf011471m I
mgf020556m Mimulus guttatus mgf020556m I
mgf026046m Mimulus guttatus mgf026046m I
Aquca_005_00169 Aquilegia coerulea Aquca_005_00169 I
Aquca_030_00227 Aquilegia coerulea Aquca_030_00227 I
Bostr.23794s0013 Boechera stricta Bostr.23794s0013 I
Bostr.24513s0205 Boechera stricta Bostr.24513s0205 I
Cagra.0567s0001 Capsella grandiflora Cagra.0567s0001 I
Cagra.1642s0010 Capsella grandiflora Cagra.1642s0010 I
Carubv10024002m.g Capsella rubella Carubv10024002m.g I
Carubv10024870m.g Capsella rubella Carubv10024870m.g I
Ciclev10002348m.g Citrus clementina Ciclev10002348m.g I
Ciclev10006113m.g Citrus clementina Ciclev10006113m.g I
Ciclev10032684m.g Citrus clementina Ciclev10032684m.g I
Ciclev10032929m.g Citrus clementina Ciclev10032929m.g I
Eucgr.B04019 Eucalyptus grandis Eucgr.B04019 I
Eucgr.G03121 Eucalyptus grandis Eucgr.G03121 I
evm.TU.supercontig_19.92 Carica papaya evm.TU.supercontig_19.92 I
evm.TU.supercontig_2.327 Carica papaya evm.TU.supercontig_2.327 I
evm.TU.supercontig_2.374 Carica papaya evm.TU.supercontig_2.374 I
gene21311-v1.0-hybrid Fragaria vesca gene21311-v1.0-hybrid I
gene28137-v1.0-hybrid Fragaria vesca gene28137-v1.0-hybrid I
gene30046-v1.0-hybrid Fragaria vesca gene30046-v1.0-hybrid I
Gorai.003G151800 Gossypium raimondii Gorai.003G151800 I
Gorai.009G295000 Gossypium raimondii Gorai.009G295000 I
Gorai.010G195100 Gossypium raimondii Gorai.010G195100 I
Gorai.011G051200 Gossypium raimondii Gorai.011G051200 I
Gorai.012G015900 Gossypium raimondii Gorai.012G015900 I
Gorai.013G005900 Gossypium raimondii Gorai.013G005900 I
Lus10009930.g Linum usitatissimum Lus10009930.g I
Lus10024183.g Linum usitatissimum Lus10024183.g I
Lus10029061.g Linum usitatissimum Lus10029061.g I
Lus10031191.g Linum usitatissimum Lus10031191.g I
Lus10031285.g Linum usitatissimum Lus10031285.g I
Lus10031769.g Linum usitatissimum Lus10031769.g I
Lus10031855.g Linum usitatissimum Lus10031855.g I
Lus10034208.g Linum usitatissimum Lus10034208.g I
MDP0000155138 Malus domestica MDP0000155138 I
MDP0000268890 Malus domestica MDP0000268890 I
MDP0000278334 Malus domestica MDP0000278334 I
MDP0000284409 Malus domestica MDP0000284409 I
orange1.1g027307m.g Citrus sinensis orange1.1g027307m.g I
orange1.1g028221m.g Citrus sinensis orange1.1g028221m.g I
orange1.1g036782m.g Citrus sinensis orange1.1g036782m.g I
orange1.1g044340m.g Citrus sinensis orange1.1g044340m.g I
Pavir.Ca01098 Panicum virgatum Pavir.Ca01098 I
Pavir.Ea03276 Panicum virgatum Pavir.Ea03276 I
Pavir.Eb03580 Panicum virgatum Pavir.Eb03580 I
Pavir.Ia01095 Panicum virgatum Pavir.Ia01095 I
Pavir.Ib04170 Panicum virgatum Pavir.Ib04170 I
Pavir.J00291 Panicum virgatum Pavir.J00291 I
Pavir.J06256 Panicum virgatum Pavir.J06256 I
Pavir.J13923 Panicum virgatum Pavir.J13923 I
Pavir.J18260 Panicum virgatum Pavir.J18260 I
SapurV1A.0042s0120 Salix purpurea SapurV1A.0042s0120 I
SapurV1A.0061s0670 Salix purpurea SapurV1A.0061s0670 I
SapurV1A.0085s0450 Salix purpurea SapurV1A.0085s0450 I
SapurV1A.0215s0070 Salix purpurea SapurV1A.0215s0070 I
SapurV1A.0222s0070 Salix purpurea SapurV1A.0222s0070 I
SapurV1A.0673s0190 Salix purpurea SapurV1A.0673s0190 I
Thhalv10017073m.g Eutrema salsugineum Thhalv10017073m.g I
Thhalv10017905m.g Eutrema salsugineum Thhalv10017905m.g I
PK03716.1 Cannabis sativa PK03716.1 I
PK11564.1 Cannabis sativa PK11564.1 I
PK17217.1 Cannabis sativa PK17217.1 I
PK21617.1 Cannabis sativa PK21617.1 I
PK29334.1 Cannabis sativa PK29334.1 I
chr1.CM0125.30.nd Lotus japonicus chr1.CM0125.30.nd I
chr2.CM1032.110.nc Lotus japonicus chr2.CM1032.110.nc I
LjSGA_040320.1 Lotus japonicus LjSGA_040320.1 I
PDK_20s1387061g002 Phoenix dactylifera PDK_20s1387061g002 I
PDK_20s1448121g001 Phoenix dactylifera PDK_20s1448121g001 N
PDK_20s1537041g001 Phoenix dactylifera PDK_20s1537041g001 N