CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

MTR_5g029680 *(Medicago truncatula)* HSF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00447 (HSF_DNA-bind)	IPR000232	MTR_5g029680	T241285_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
HSFA1E M06939_2.00	Arabidopsis thaliana	RGAANNTTCTAGA	TCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSFA1E_col_a	0.541	0.862
HSFA1E M06940_2.00	Arabidopsis thaliana	RGAASNTTCTAGAAN	NTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFA1E_colamp_a	0.541	0.862
HSFA1B M06948_2.00	Arabidopsis thaliana	GAANNTTCTAGA	TCTAGAANNTTC	Dap-seq OMalley et al.(2016) HSF3_col_a	0.517	0.851
HSFA1B M06949_2.00	Arabidopsis thaliana	TTCYRG	CYRGAA	Dap-seq OMalley et al.(2016) HSF3_colamp_a	0.517	0.851
HSFA4A M06947_2.00	Arabidopsis thaliana	NNNRGAABBTTCTAGAANN	NNTTCTAGAAVVTTCYNNN	Dap-seq OMalley et al.(2016) HSF21_col_a	0.481	0.747
HSFA6B M06941_2.00	Arabidopsis thaliana	RGAASNTTCTAGA	TCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFA6B_colamp_a	0.474	0.782
HSFA6B M06942_2.00	Arabidopsis thaliana	RGAABNTTCTRGAAN	NTTCYAGAANVTTCY	Dap-seq OMalley et al.(2016) HSFA6B_col	0.474	0.782
HSFB4 M06936_2.00	Arabidopsis thaliana	RGAASNTTCTAGAAN	NTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFB4_col_a	0.456	0.736
HSFB2A M00869_2.00	Arabidopsis thaliana	NNNNNTTCB	VGAANNNNN	PBM Franco-Zorrilla et al.(2014) HSFB2A	0.434	0.655
HSFB2A M06952_2.00	Arabidopsis thaliana	GAANNTTCYAGA	TCTRGAANNTTC	Dap-seq OMalley et al.(2016) HSF6_col_a	0.434	0.655
HSFB2B M06945_2.00	Arabidopsis thaliana	RGAANNTTCTAGAA	TTCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSF7_col_a	0.428	0.690
HSFB2B M06946_2.00	Arabidopsis thaliana	RGAANNTTCTAGAA	TTCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSF7_colamp_a	0.428	0.690
HSFA6A M06950_2.00	Arabidopsis thaliana	GAASNTTCTAGAANNW	WNNTTCTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFA6A_col_a	0.423	0.678
HSFA6A M06951_2.00	Arabidopsis thaliana	GAASNTTCTAGAA	TTCTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFA6A_colamp_a	0.423	0.678
HSFB3 M06937_2.00	Arabidopsis thaliana	RRAANMWTCTAGAAV	BTTCTAGAWKNTTYY	Dap-seq OMalley et al.(2016) HSFB3_col_a	0.402	0.644
HSFB3 M06938_2.00	Arabidopsis thaliana	AABSTTCTAGAAN	NTTCTAGAASVTT	Dap-seq OMalley et al.(2016) HSFB3_colamp_a	0.402	0.644
HSFC1 M00868_2.00	Arabidopsis thaliana	NDTCBNNN	NNNVGAHN	PBM Franco-Zorrilla et al.(2014) HSFC1	0.400	0.690
HSFC1 M06943_2.00	Arabidopsis thaliana	GAASNTTCTAG	CTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFC1_col_a	0.400	0.690
HSFC1 M06944_2.00	Arabidopsis thaliana	RGAASNTTCTAGAANVW	WBNTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFC1_colamp_a	0.400	0.690
HSF1 M03329_2.00	Homo sapiens	GAANVTTCBVGAA	TTCBVGAABNTTC	SELEX Jolma et al.(2013) HSF1_1	0.324	0.575
HSF1 M03330_2.00	Homo sapiens	GAANRTTCBAGAA	TTCTVGAAYNTTC	SELEX Jolma et al.(2013) HSF1_2	0.324	0.575
HSF1 M05523_2.00	Homo sapiens	VGAABVTTCBVGAWN	NWTCBVGAABVTTCB	SELEX Yin et al.(2017) HSF1_eDBD_HT-SELEX	0.324	0.575
HSF1 M05525_2.00	Homo sapiens	VGAANRTTCKVGAAN	NTTCBMGAAYNTTCB	SELEX Yin et al.(2017) HSF1_FL_HT-SELEX	0.324	0.575
HSF1 M07977_2.00	Homo sapiens	GDCSYGGGTTCRADYCCC	GGGRHTYGAACCCRSGHC	ChIP-seq Gerstein et al.(2012) HepG2_HSF1_Stanford	0.324	0.575
HSF1 M09230_2.00	Homo sapiens	NRGAANNTTCYRGAA	TTCYRGAANNTTCYN	Misc Kulakovskiy et al.(2013) HSF1_HUMAN.H11MO.0.A	0.324	0.575
Hsf1 M09232_2.00	Mus musculus	NRGAANNTTCYRGAA	TTCYRGAANNTTCYN	Misc Kulakovskiy et al.(2013) HSF1_MOUSE.H11MO.0.A	0.324	0.575
HSF1 M09592_2.00	Homo sapiens	NNBBCYRGAANNTTCYRGVV	BBCYRGAANNTTCYRGVVNN	Misc Heinz et al.(2010) HepG2-HSF1_GSE31477	0.324	0.575
Hsf1 M09593_2.00	Mus musculus	NRGAANNTTCYRGAA	TTCYRGAANNTTCYN	Misc Heinz et al.(2010) Striatum-HSF1_GSE38000	0.324	0.575
HSF1 M10863_2.00	Homo sapiens	NGAAHNTTCY	RGAANDTTCN	Transfac Matys et al.(2006) V$HSF1_01	0.324	0.575
HSF1 M10864_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HSF1_Q5_01	0.324	0.575
HSF1 M10865_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HSF1_Q5	0.324	0.575
HSF1 M10866_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HSF1_Q6_01	0.324	0.575
HSF1 M10867_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HSF1_Q6	0.324	0.575
HSF1 M10868_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HSF_Q6	0.324	0.575
HSF1 M05524_2.00	Homo sapiens	RGAANRTTCYRGAWN	NWTCYRGAAYNTTCY	SELEX Yin et al.(2017) HSF1_eDBD_Methyl-HT-SELEX	0.324	0.575
HSF1 M05526_2.00	Homo sapiens	RGAANVTTCYRGAWN	NWTCYRGAABNTTCY	SELEX Yin et al.(2017) HSF1_FL_Methyl-HT-SELEX	0.324	0.575
For this family, TFs with SR scores > 0.318* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
AES95803	HSF	33	123	FLSKTYDMVDDPSTDAIVSWSATNNSFVVWDPPEFARDLLPKFFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKQLLKSISRRK

Links
Other HSF family TFs
Other *Medicago truncatula* TFs

1518 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ENSAMEG00000010576	Ailuropoda melanoleuca	ENSAMEG00000010576	I
ENSBTAP00000007323-D1	Bos grunniens	ENSBTAP00000007323-D1	I
ZNF205	Bos taurus	ENSBTAG00000005572	I
ZNF205	Callithrix jacchus	ENSCJAG00000015546	I
ZNF205	Canis familiaris	ENSCAFG00000023869	I
ENSCSAG00000010150	Chlorocebus sabaeus	ENSCSAG00000010150	I
ZNF205	Dasypus novemcinctus	ENSDNOG00000037994	I
ZNF205	Equus caballus	ENSECAG00000009869	I
ZNF205	Erinaceus europaeus	ENSEEUG00000010049	I
ZNF205	Felis catus	ENSFCAG00000026028	I
ZNF205	Gorilla gorilla	ENSGGOG00000012036	I
ZNF205	Homo sapiens	ENSG00000122386	D
ENSSTOG00000003803	Ictidomys tridecemlineatus	ENSSTOG00000003803	I
ZNF205	Loxodonta africana	ENSLAFG00000021564	I
ENSP00000219091	Macaca fascicularis	ENSP00000219091	I
ZNF205	Macaca mulatta	ENSMMUG00000009487	I
ENSMEUG00000004328	Macropus eugenii	ENSMEUG00000004328	I
ZNF205	Microcebus murinus	ENSMICG00000009089	I
ENSMPUG00000015184	Mustela putorius furo	ENSMPUG00000015184	I
Zfp13	Mus musculus	ENSMUSG00000062012	I
Myotis_brandtii_ZNF205_10028065	Myotis brandtii	Myotis_brandtii_ZNF205_10028065	I
ENSNLEG00000009600	Nomascus leucogenys	ENSNLEG00000009600	I
ZNF205	Ochotona princeps	ENSOPRG00000005820	I
ZNF205	Otolemur garnettii	ENSOGAG00000003693	I
ENSOARG00000001319	Ovis aries	ENSOARG00000001319	I
ZNF205	Pan troglodytes	ENSPTRG00000007686	I
ENSPANG00000024398	Papio anubis	ENSPANG00000024398	I
ENSPPYG00000007034	Pongo abelii	ENSPPYG00000007034	I
ZNF205	Pteropus vampyrus	ENSPVAG00000001475	I
Zfp13	Rattus norvegicus	ENSRNOG00000003455	I
ZNF205	Sorex araneus	ENSSARG00000006551	I
ZNF205	Sus scrofa	ENSSSCG00000029375	I

MTR_5g029680 (Medicago truncatula) HSF

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1518 Related TFs

MTR_5g029680 **(Medicago truncatula)
HSF**