CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

OPUNC04G19790 *(Oryza punctata)* HSF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00447 (HSF_DNA-bind)	IPR000232	OPUNC04G19790	T241501_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
HSFB2B M06945_2.00	Arabidopsis thaliana	RGAANNTTCTAGAA	TTCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSF7_col_a	0.502	0.816
HSFB2B M06946_2.00	Arabidopsis thaliana	RGAANNTTCTAGAA	TTCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSF7_colamp_a	0.502	0.816
HSFB2A M00869_2.00	Arabidopsis thaliana	NNNNNTTCB	VGAANNNNN	PBM Franco-Zorrilla et al.(2014) HSFB2A	0.462	0.747
HSFB2A M06952_2.00	Arabidopsis thaliana	GAANNTTCYAGA	TCTRGAANNTTC	Dap-seq OMalley et al.(2016) HSF6_col_a	0.462	0.747
HSFB4 M06936_2.00	Arabidopsis thaliana	RGAASNTTCTAGAAN	NTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFB4_col_a	0.454	0.736
HSFB3 M06937_2.00	Arabidopsis thaliana	RRAANMWTCTAGAAV	BTTCTAGAWKNTTYY	Dap-seq OMalley et al.(2016) HSFB3_col_a	0.441	0.690
HSFB3 M06938_2.00	Arabidopsis thaliana	AABSTTCTAGAAN	NTTCTAGAASVTT	Dap-seq OMalley et al.(2016) HSFB3_colamp_a	0.441	0.690
HSFA4A M06947_2.00	Arabidopsis thaliana	NNNRGAABBTTCTAGAANN	NNTTCTAGAAVVTTCYNNN	Dap-seq OMalley et al.(2016) HSF21_col_a	0.406	0.632
HSFC1 M00868_2.00	Arabidopsis thaliana	NDTCBNNN	NNNVGAHN	PBM Franco-Zorrilla et al.(2014) HSFC1	0.388	0.598
HSFC1 M06943_2.00	Arabidopsis thaliana	GAASNTTCTAG	CTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFC1_col_a	0.388	0.598
HSFC1 M06944_2.00	Arabidopsis thaliana	RGAASNTTCTAGAANVW	WBNTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFC1_colamp_a	0.388	0.598
HSFA6B M06941_2.00	Arabidopsis thaliana	RGAASNTTCTAGA	TCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFA6B_colamp_a	0.383	0.644
HSFA6B M06942_2.00	Arabidopsis thaliana	RGAABNTTCTRGAAN	NTTCYAGAANVTTCY	Dap-seq OMalley et al.(2016) HSFA6B_col	0.383	0.644
HSFA1E M06939_2.00	Arabidopsis thaliana	RGAANNTTCTAGA	TCTAGAANNTTCY	Dap-seq OMalley et al.(2016) HSFA1E_col_a	0.382	0.632
HSFA1E M06940_2.00	Arabidopsis thaliana	RGAASNTTCTAGAAN	NTTCTAGAANSTTCY	Dap-seq OMalley et al.(2016) HSFA1E_colamp_a	0.382	0.632
HSFA6A M06950_2.00	Arabidopsis thaliana	GAASNTTCTAGAANNW	WNNTTCTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFA6A_col_a	0.380	0.609
HSFA6A M06951_2.00	Arabidopsis thaliana	GAASNTTCTAGAA	TTCTAGAANSTTC	Dap-seq OMalley et al.(2016) HSFA6A_colamp_a	0.380	0.609
HSFA1B M06948_2.00	Arabidopsis thaliana	GAANNTTCTAGA	TCTAGAANNTTC	Dap-seq OMalley et al.(2016) HSF3_col_a	0.361	0.644
HSFA1B M06949_2.00	Arabidopsis thaliana	TTCYRG	CYRGAA	Dap-seq OMalley et al.(2016) HSF3_colamp_a	0.361	0.644
HSF1 M03329_2.00	Homo sapiens	GAANVTTCBVGAA	TTCBVGAABNTTC	SELEX Jolma et al.(2013) HSF1_1	0.342	0.529
HSF1 M03330_2.00	Homo sapiens	GAANRTTCBAGAA	TTCTVGAAYNTTC	SELEX Jolma et al.(2013) HSF1_2	0.342	0.529
HSF1 M05523_2.00	Homo sapiens	VGAABVTTCBVGAWN	NWTCBVGAABVTTCB	SELEX Yin et al.(2017) HSF1_eDBD_HT-SELEX	0.342	0.529
HSF1 M05525_2.00	Homo sapiens	VGAANRTTCKVGAAN	NTTCBMGAAYNTTCB	SELEX Yin et al.(2017) HSF1_FL_HT-SELEX	0.342	0.529
HSF1 M07977_2.00	Homo sapiens	GDCSYGGGTTCRADYCCC	GGGRHTYGAACCCRSGHC	ChIP-seq Gerstein et al.(2012) HepG2_HSF1_Stanford	0.342	0.529
HSF1 M09230_2.00	Homo sapiens	NRGAANNTTCYRGAA	TTCYRGAANNTTCYN	Misc Kulakovskiy et al.(2013) HSF1_HUMAN.H11MO.0.A	0.342	0.529
Hsf1 M09232_2.00	Mus musculus	NRGAANNTTCYRGAA	TTCYRGAANNTTCYN	Misc Kulakovskiy et al.(2013) HSF1_MOUSE.H11MO.0.A	0.342	0.529
HSF1 M09592_2.00	Homo sapiens	NNBBCYRGAANNTTCYRGVV	BBCYRGAANNTTCYRGVVNN	Misc Heinz et al.(2010) HepG2-HSF1_GSE31477	0.342	0.529
Hsf1 M09593_2.00	Mus musculus	NRGAANNTTCYRGAA	TTCYRGAANNTTCYN	Misc Heinz et al.(2010) Striatum-HSF1_GSE38000	0.342	0.529
HSF1 M10863_2.00	Homo sapiens	NGAAHNTTCY	RGAANDTTCN	Transfac Matys et al.(2006) V$HSF1_01	0.342	0.529
HSF1 M10864_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HSF1_Q5_01	0.342	0.529
HSF1 M10865_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HSF1_Q5	0.342	0.529
HSF1 M10866_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HSF1_Q6_01	0.342	0.529
HSF1 M10867_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HSF1_Q6	0.342	0.529
HSF1 M10868_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HSF_Q6	0.342	0.529
HSF1 M05524_2.00	Homo sapiens	RGAANRTTCYRGAWN	NWTCYRGAAYNTTCY	SELEX Yin et al.(2017) HSF1_eDBD_Methyl-HT-SELEX	0.342	0.529
HSF1 M05526_2.00	Homo sapiens	RGAANVTTCYRGAWN	NWTCYRGAABNTTCY	SELEX Yin et al.(2017) HSF1_FL_Methyl-HT-SELEX	0.342	0.529
HSF4 M03325_2.00	Homo sapiens	GAANNTTCBVGAA	TTCBVGAANNTTC	SELEX Jolma et al.(2013) HSF4_1	0.332	0.517
HSF4 M05509_2.00	Homo sapiens	VGAABVTTCKVGAAN	NTTCBMGAABVTTCB	SELEX Yin et al.(2017) HSF4_eDBD_HT-SELEX	0.332	0.517
HSF4 M10862_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HSF4_Q3	0.332	0.517
HSF4 M05510_2.00	Homo sapiens	RGAABVWDCYRGAWN	NWTCYRGHWBVTTCY	SELEX Yin et al.(2017) HSF4_eDBD_Methyl-HT-SELEX	0.332	0.517
For this family, TFs with SR scores > 0.318* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
OPUNC04G19790.1	HSF	11	101	FLTKTYAMVEDPSTDETISWNDSGTAFVVWRPAEFARDLLPKHFKHSNFSSFVRQLNTYGFKKVVADRWEFANDCFRRGEKHLLGGIQRRK

Links
Other HSF family TFs
Other *Oryza punctata* TFs

1519 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
BGIOSGA004852	Oryza indica	BGIOSGA004852	N
BGIOSGA017964	Oryza indica	BGIOSGA017964	N
BGIOSGA017965	Oryza indica	BGIOSGA017965	N
BRADI2G55797	Brachypodium distachyon	BRADI2G55797	N
F775_31610	Aegilops tauschii	F775_31610	N
GRMZM2G027914	Zea mays	GRMZM2G027914	N
GRMZM2G091201	Zea mays	GRMZM2G091201	N
GRMZM2G143640	Zea mays	GRMZM2G143640	N
GSMUA_Achr11G09110_001	Musa acuminata	GSMUA_Achr11G09110_001	N
LPERR01G32800	Leersia perrieri	LPERR01G32800	N
LPERR05G14380	Leersia perrieri	LPERR05G14380	N
OB05G25990	Oryza brachyantha	OB05G25990	N
OBART01G38220	Oryza barthii	OBART01G38220	N
OGLUM01G42400	Oryza glumaepatula	OGLUM01G42400	N
OGLUM05G19230	Oryza glumaepatula	OGLUM05G19230	N
OGLUM05G19240	Oryza glumaepatula	OGLUM05G19240	N
OMERI01G35110	Oryza meridionalis	OMERI01G35110	N
ONIVA01G42920	Oryza nivara	ONIVA01G42920	N
ONIVA05G19090	Oryza nivara	ONIVA05G19090	N
OPUNC01G36990	Oryza punctata	OPUNC01G36990	N
OPUNC05G16000	Oryza punctata	OPUNC05G16000	N
ORGLA01G0320500	Oryza glaberrima	ORGLA01G0320500	N
ORGLA05G0157700	Oryza glaberrima	ORGLA05G0157700	N
ORUFI01G41590	Oryza rufipogon	ORUFI01G41590	N
ORUFI05G19330	Oryza rufipogon	ORUFI05G19330	N
ORUFI05G19340	Oryza rufipogon	ORUFI05G19340	N
OS01G0863300	Oryza sativa	OS01G0863300	N
OS05G0442400	Oryza sativa	OS05G0442400	N
Pavir.Ea03744	Panicum virgatum	Pavir.Ea03744	N
Pavir.J02275	Panicum virgatum	Pavir.J02275	N
Pavir.J08778	Panicum virgatum	Pavir.J08778	N
Sb03g040730	Sorghum bicolor	Sb03g040730	N
Sb09g021770	Sorghum bicolor	Sb09g021770	N
Si003047m.g	Setaria italica	Si003047m.g	N
TRAES3BF019300020CFD_g	Triticum aestivum	TRAES3BF019300020CFD_g	N

OPUNC04G19790 (Oryza punctata) HSF

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1519 Related TFs

OPUNC04G19790 **(Oryza punctata)
HSF**