CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OPUNC04G19790
(
Oryza punctata
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00447 (HSF_DNA-bind)
IPR000232
OPUNC04G19790
T241501_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HSFB2B
M06945_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_col_a
0.502
0.816
HSFB2B
M06946_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_colamp_a
0.502
0.816
HSFB2A
M00869_2.00
Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN
PBM
Franco-Zorrilla et al.(2014)
HSFB2A
0.462
0.747
HSFB2A
M06952_2.00
Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF6_col_a
0.462
0.747
HSFB4
M06936_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFB4_col_a
0.454
0.736
HSFB3
M06937_2.00
Arabidopsis thaliana
RRAANMWTCTAGAAV
BTTCTAGAWKNTTYY
Dap-seq
OMalley et al.(2016)
HSFB3_col_a
0.441
0.690
HSFB3
M06938_2.00
Arabidopsis thaliana
AABSTTCTAGAAN
NTTCTAGAASVTT
Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a
0.441
0.690
HSFA4A
M06947_2.00
Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN
Dap-seq
OMalley et al.(2016)
HSF21_col_a
0.406
0.632
HSFC1
M00868_2.00
Arabidopsis thaliana
NDTCBNNN
NNNVGAHN
PBM
Franco-Zorrilla et al.(2014)
HSFC1
0.388
0.598
HSFC1
M06943_2.00
Arabidopsis thaliana
GAASNTTCTAG
CTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFC1_col_a
0.388
0.598
HSFC1
M06944_2.00
Arabidopsis thaliana
RGAASNTTCTAGAANVW
WBNTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a
0.388
0.598
HSFA6B
M06941_2.00
Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a
0.383
0.644
HSFA6B
M06942_2.00
Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY
Dap-seq
OMalley et al.(2016)
HSFA6B_col
0.383
0.644
HSFA1E
M06939_2.00
Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSFA1E_col_a
0.382
0.632
HSFA1E
M06940_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a
0.382
0.632
HSFA6A
M06950_2.00
Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFA6A_col_a
0.380
0.609
HSFA6A
M06951_2.00
Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a
0.380
0.609
HSFA1B
M06948_2.00
Arabidopsis thaliana
GAANNTTCTAGA
TCTAGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF3_col_a
0.361
0.644
HSFA1B
M06949_2.00
Arabidopsis thaliana
TTCYRG
CYRGAA
Dap-seq
OMalley et al.(2016)
HSF3_colamp_a
0.361
0.644
HSF1
M03329_2.00
Homo sapiens
GAANVTTCBVGAA
TTCBVGAABNTTC
SELEX
Jolma et al.(2013)
HSF1_1
0.342
0.529
HSF1
M03330_2.00
Homo sapiens
GAANRTTCBAGAA
TTCTVGAAYNTTC
SELEX
Jolma et al.(2013)
HSF1_2
0.342
0.529
HSF1
M05523_2.00
Homo sapiens
VGAABVTTCBVGAWN
NWTCBVGAABVTTCB
SELEX
Yin et al.(2017)
HSF1_eDBD_HT-SELEX
0.342
0.529
HSF1
M05525_2.00
Homo sapiens
VGAANRTTCKVGAAN
NTTCBMGAAYNTTCB
SELEX
Yin et al.(2017)
HSF1_FL_HT-SELEX
0.342
0.529
HSF1
M07977_2.00
Homo sapiens
GDCSYGGGTTCRADYCCC
GGGRHTYGAACCCRSGHC
ChIP-seq
Gerstein et al.(2012)
HepG2_HSF1_Stanford
0.342
0.529
HSF1
M09230_2.00
Homo sapiens
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN
Misc
Kulakovskiy et al.(2013)
HSF1_HUMAN.H11MO.0.A
0.342
0.529
Hsf1
M09232_2.00
Mus musculus
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN
Misc
Kulakovskiy et al.(2013)
HSF1_MOUSE.H11MO.0.A
0.342
0.529
HSF1
M09592_2.00
Homo sapiens
NNBBCYRGAANNTTCYRGVV
BBCYRGAANNTTCYRGVVNN
Misc
Heinz et al.(2010)
HepG2-HSF1_GSE31477
0.342
0.529
Hsf1
M09593_2.00
Mus musculus
NRGAANNTTCYRGAA
TTCYRGAANNTTCYN
Misc
Heinz et al.(2010)
Striatum-HSF1_GSE38000
0.342
0.529
HSF1
M10863_2.00
Homo sapiens
NGAAHNTTCY
RGAANDTTCN
Transfac
Matys et al.(2006)
V$HSF1_01
0.342
0.529
HSF1
M10864_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q5_01
0.342
0.529
HSF1
M10865_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q5
0.342
0.529
HSF1
M10866_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q6_01
0.342
0.529
HSF1
M10867_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF1_Q6
0.342
0.529
HSF1
M10868_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF_Q6
0.342
0.529
HSF1
M05524_2.00
Homo sapiens
RGAANRTTCYRGAWN
NWTCYRGAAYNTTCY
SELEX
Yin et al.(2017)
HSF1_eDBD_Methyl-HT-SELEX
0.342
0.529
HSF1
M05526_2.00
Homo sapiens
RGAANVTTCYRGAWN
NWTCYRGAABNTTCY
SELEX
Yin et al.(2017)
HSF1_FL_Methyl-HT-SELEX
0.342
0.529
HSF4
M03325_2.00
Homo sapiens
GAANNTTCBVGAA
TTCBVGAANNTTC
SELEX
Jolma et al.(2013)
HSF4_1
0.332
0.517
HSF4
M05509_2.00
Homo sapiens
VGAABVTTCKVGAAN
NTTCBMGAABVTTCB
SELEX
Yin et al.(2017)
HSF4_eDBD_HT-SELEX
0.332
0.517
HSF4
M10862_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HSF4_Q3
0.332
0.517
HSF4
M05510_2.00
Homo sapiens
RGAABVWDCYRGAWN
NWTCYRGHWBVTTCY
SELEX
Yin et al.(2017)
HSF4_eDBD_Methyl-HT-SELEX
0.332
0.517
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OPUNC04G19790.1
HSF
11
101
FLTKTYAMVEDPSTDETISWNDSGTAFVVWRPAEFARDLLPKHFKHSNFSSFVRQLNTYGFKKVVADRWEFANDCFRRGEKHLLGGIQRRK
Links
Other
HSF
family TFs
Other
Oryza punctata
TFs
1519 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA004852
Oryza indica
BGIOSGA004852
N
BGIOSGA017964
Oryza indica
BGIOSGA017964
N
BGIOSGA017965
Oryza indica
BGIOSGA017965
N
BRADI2G55797
Brachypodium distachyon
BRADI2G55797
N
F775_31610
Aegilops tauschii
F775_31610
N
GRMZM2G027914
Zea mays
GRMZM2G027914
N
GRMZM2G091201
Zea mays
GRMZM2G091201
N
GRMZM2G143640
Zea mays
GRMZM2G143640
N
GSMUA_Achr11G09110_001
Musa acuminata
GSMUA_Achr11G09110_001
N
LPERR01G32800
Leersia perrieri
LPERR01G32800
N
LPERR05G14380
Leersia perrieri
LPERR05G14380
N
OB05G25990
Oryza brachyantha
OB05G25990
N
OBART01G38220
Oryza barthii
OBART01G38220
N
OGLUM01G42400
Oryza glumaepatula
OGLUM01G42400
N
OGLUM05G19230
Oryza glumaepatula
OGLUM05G19230
N
OGLUM05G19240
Oryza glumaepatula
OGLUM05G19240
N
OMERI01G35110
Oryza meridionalis
OMERI01G35110
N
ONIVA01G42920
Oryza nivara
ONIVA01G42920
N
ONIVA05G19090
Oryza nivara
ONIVA05G19090
N
OPUNC01G36990
Oryza punctata
OPUNC01G36990
N
OPUNC05G16000
Oryza punctata
OPUNC05G16000
N
ORGLA01G0320500
Oryza glaberrima
ORGLA01G0320500
N
ORGLA05G0157700
Oryza glaberrima
ORGLA05G0157700
N
ORUFI01G41590
Oryza rufipogon
ORUFI01G41590
N
ORUFI05G19330
Oryza rufipogon
ORUFI05G19330
N
ORUFI05G19340
Oryza rufipogon
ORUFI05G19340
N
OS01G0863300
Oryza sativa
OS01G0863300
N
OS05G0442400
Oryza sativa
OS05G0442400
N
Pavir.Ea03744
Panicum virgatum
Pavir.Ea03744
N
Pavir.J02275
Panicum virgatum
Pavir.J02275
N
Pavir.J08778
Panicum virgatum
Pavir.J08778
N
Sb03g040730
Sorghum bicolor
Sb03g040730
N
Sb09g021770
Sorghum bicolor
Sb09g021770
N
Si003047m.g
Setaria italica
Si003047m.g
N
TRAES3BF019300020CFD_g
Triticum aestivum
TRAES3BF019300020CFD_g
N