CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thaps22570
(
Thalassiosira pseudonana
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00447 (HSF_DNA-bind)
IPR000232
Thaps22570
T242218_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HSF1
M00060_2.00
Saccharomyces cerevisiae
NNNTTCNNN
NNNGAANNN
PBM
Badis et al.(2008)
HSF1_4530
0.333
0.427
HSF1
M07489_2.00
Saccharomyces cerevisiae
HVTTCCAT
ATGGAABD
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0319.1
0.333
0.427
HSF1
M08577_2.00
Saccharomyces cerevisiae
TTCTAGAA
TTCTAGAA
Misc
DeBoer et al.(2011)
YGL073W_1461
0.333
0.427
HSF1
M08578_2.00
Saccharomyces cerevisiae
GAANNNNNWRGAA
TTCYWNNNNNTTC
Misc
DeBoer et al.(2011)
YGL073W_411
0.333
0.427
HSF1
M08579_2.00
Saccharomyces cerevisiae
HVTTCCAT
ATGGAABD
Misc
DeBoer et al.(2011)
YGL073W_476
0.333
0.427
HSF1
M08580_2.00
Saccharomyces cerevisiae
RGAABNTTCTRGAA
TTCYAGAANVTTCY
Misc
DeBoer et al.(2011)
YGL073W_615
0.333
0.427
HSF1
M10874_2.00
Saccharomyces cerevisiae
RGAANRGAANRGAAN
NTTCYNTTCYNTTCY
Transfac
Matys et al.(2006)
F$HSF_02
0.333
0.427
HSF1
M10875_2.00
Saccharomyces cerevisiae
RGAANNTTCYNTTCY
RGAANRGAANNTTCY
Transfac
Matys et al.(2006)
F$HSF_03
0.333
0.427
HSF1
M10876_2.00
Saccharomyces cerevisiae
RGAANNTTCYRGAAN
NTTCYRGAANNTTCY
Transfac
Matys et al.(2006)
F$HSF_04
0.333
0.427
HSF1
M10877_2.00
Saccharomyces cerevisiae
NTTCYNTTCYRGAAN
NTTCYRGAANRGAAN
Transfac
Matys et al.(2006)
F$HSF_05
0.333
0.427
HSF1
M10878_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$HSF_Q6
0.333
0.427
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thaps22570
HSF
95
187
LPAKLNAMLSDPEISSFITWMPHGRSFSVVDRENFAKYALPRYFGHDNFPSFVRIVNAWGFRRIVSGKDRDSYYHELFLRGRPDLHERMKRVP
Links
Other
HSF
family TFs
Other
Thalassiosira pseudonana
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Thaps264072
Thalassiosira pseudonana
Thaps264072
N
0.441
Thaps264346
Thalassiosira pseudonana
Thaps264346
I
0.432
Thaps12066
Thalassiosira pseudonana
Thaps12066
N
0.417
Thaps9607
Thalassiosira pseudonana
Thaps9607
N
0.415
gw1.21.273.1
Fragilariopsis cylindrus
gw1.21.273.1
N
0.395
Phatr3_EG02327
Phaeodactylum tricornutum
Phatr3_EG02327
N
0.390
Thaps264036
Thalassiosira pseudonana
Thaps264036
N
0.384
Phatr3_J49594
Phaeodactylum tricornutum
Phatr3_J49594
I
0.381
Thaps22135
Thalassiosira pseudonana
Thaps22135
N
0.375
Thaps264590
Thalassiosira pseudonana
Thaps264590
N
0.368
Thaps8215
Thalassiosira pseudonana
Thaps8215
N
0.365
Thaps11244
Thalassiosira pseudonana
Thaps11244
N
0.364
HSF1
Phaeodactylum tricornutum
Phatr3_J44099
N
0.361
Phatr3_J50481
Phaeodactylum tricornutum
Phatr3_J50481
N
0.361
Thaps12116
Thalassiosira pseudonana
Thaps12116
N
0.359
CAOG_06646
Capsaspora owczarzaki
CAOG_06646
I
0.356
Thaps23803
Thalassiosira pseudonana
Thaps23803
N
0.356
CAGL0H03443g
Candida glabrata
CAGL0H03443g
I
0.355
Phatr3_J48667
Phaeodactylum tricornutum
Phatr3_J48667
N
0.354
Thaps25112
Thalassiosira pseudonana
Thaps25112
N
0.352
e_gw1.21.303.1
Fragilariopsis cylindrus
e_gw1.21.303.1
N
0.348
Thaps263978
Thalassiosira pseudonana
Thaps263978
N
0.345
e_gw1.2.1757.1
Fragilariopsis cylindrus
e_gw1.2.1757.1
N
0.345
Thaps22932
Thalassiosira pseudonana
Thaps22932
N
0.343
Phatr3_J39785
Phaeodactylum tricornutum
Phatr3_J39785
N
0.341
Phatr3_EG02471
Phaeodactylum tricornutum
Phatr3_EG02471
N
0.339
Phatr3_J31764
Phaeodactylum tricornutum
Phatr3_J31764
N
0.337
Thaps269233
Thalassiosira pseudonana
Thaps269233
N
0.337
SKUD_205711
Saccharomyces kudriavzevii
SKUD_205711
I
0.336
SU7_1143
Saccharomyces arboricola
SU7_1143
I
0.336
Phatr3_J44917
Phaeodactylum tricornutum
Phatr3_J44917
N
0.334
ZBAI_03930
Zygosaccharomyces bailii
ZBAI_03930
I
0.334
ZBAI_09737
Zygosaccharomyces bailii
ZBAI_09737
I
0.334
ZYRO0G08734g
Zygosaccharomyces rouxii
ZYRO0G08734g
I
0.334
HSF1
Saccharomyces cerevisiae
YGL073W
D
0.333
7859_YGL073W
Saccharomyces mikatae
7859_YGL073W
I
0.333
8607_YGL073W
Saccharomyces paradoxus
8607_YGL073W
I
0.333
Thaps8654
Thalassiosira pseudonana
Thaps8654
I
0.332
Phatr3_J45926
Phaeodactylum tricornutum
Phatr3_J45926
N
0.331
HSF2
Phaeodactylum tricornutum
Phatr3_J55070
N
0.329
Thaps11148
Thalassiosira pseudonana
Thaps11148
N
0.329
Thaps22414
Thalassiosira pseudonana
Thaps22414
N
0.329
e_gw1.2.349.1
Fragilariopsis cylindrus
e_gw1.2.349.1
N
0.329
estExt_Genewise1Plus.C_130130
Fragilariopsis cylindrus
estExt_Genewise1Plus.C_130130
N
0.329
NDAI_0I01110
Naumovozyma dairenensis
NDAI_0I01110
I
0.328
Ecym_2208
Eremothecium cymbalariae
Ecym_2208
I
0.327
AACERI_AaceriAFL085C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAFL085C
I
0.325
AGOS_AFL085C
Ashbya gossypii
AGOS_AFL085C
I
0.325
KUCA_T00004695001
Kuraishia capsulata
KUCA_T00004695001
I
0.324
TDEL_0E05170
Torulaspora delbrueckii
TDEL_0E05170
I
0.324
Thaps262668
Thalassiosira pseudonana
Thaps262668
N
0.324
estExt_fgenesh2_pg.C_420088
Fragilariopsis cylindrus
estExt_fgenesh2_pg.C_420088
I
0.324
Phatr3_J44586
Phaeodactylum tricornutum
Phatr3_J44586
N
0.323
Thaps24636
Thalassiosira pseudonana
Thaps24636
N
0.322
Phatr3_J47952
Phaeodactylum tricornutum
Phatr3_J47952
N
0.321
7991_YGL073W
Saccharomyces bayanus
7991_YGL073W
I
0.321
ENSFALG00000011294
Ficedula albicollis
ENSFALG00000011294
I
0.320
HSF2
Taeniopygia guttata
ENSTGUG00000011838
I
0.320
Phatr3_J43363
Phaeodactylum tricornutum
Phatr3_J43363
N
0.320
Phatr3_J48558
Phaeodactylum tricornutum
Phatr3_J48558
N
0.320
YALI0_E13948g
Yarrowia lipolytica
YALI0_E13948g
I
0.320
gw1.1.2017.1
Fragilariopsis cylindrus
gw1.1.2017.1
N
0.319
HPODL_00106
Ogataea parapolymorpha
HPODL_00106
I
0.318