Thaps8654 (Thalassiosira pseudonana)
HSF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00447 (HSF_DNA-bind) IPR000232 Thaps8654 T242284_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HSF1
M00060_2.00 		Saccharomyces cerevisiae
NNNTTCNNN
NNNGAANNN		 PBM
Badis et al.(2008)
HSF1_4530 		0.328 0.326
HSF1
M07489_2.00 		Saccharomyces cerevisiae
HVTTCCAT
ATGGAABD		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0319.1 		0.328 0.326
HSF1
M08577_2.00 		Saccharomyces cerevisiae
TTCTAGAA
TTCTAGAA		 Misc
DeBoer et al.(2011)
YGL073W_1461 		0.328 0.326
HSF1
M08578_2.00 		Saccharomyces cerevisiae
GAANNNNNWRGAA
TTCYWNNNNNTTC		 Misc
DeBoer et al.(2011)
YGL073W_411 		0.328 0.326
HSF1
M08579_2.00 		Saccharomyces cerevisiae
HVTTCCAT
ATGGAABD		 Misc
DeBoer et al.(2011)
YGL073W_476 		0.328 0.326
HSF1
M08580_2.00 		Saccharomyces cerevisiae
RGAABNTTCTRGAA
TTCYAGAANVTTCY		 Misc
DeBoer et al.(2011)
YGL073W_615 		0.328 0.326
HSF1
M10874_2.00 		Saccharomyces cerevisiae
RGAANRGAANRGAAN
NTTCYNTTCYNTTCY		 Transfac
Matys et al.(2006)
F$HSF_02 		0.328 0.326
HSF1
M10875_2.00 		Saccharomyces cerevisiae
RGAANNTTCYNTTCY
RGAANRGAANNTTCY		 Transfac
Matys et al.(2006)
F$HSF_03 		0.328 0.326
HSF1
M10876_2.00 		Saccharomyces cerevisiae
RGAANNTTCYRGAAN
NTTCYRGAANNTTCY		 Transfac
Matys et al.(2006)
F$HSF_04 		0.328 0.326
HSF1
M10877_2.00 		Saccharomyces cerevisiae
NTTCYNTTCYRGAAN
NTTCYRGAANRGAAN		 Transfac
Matys et al.(2006)
F$HSF_05 		0.328 0.326
HSF1
M10878_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$HSF_Q6 		0.328 0.326
For this family, TFs with SR scores > 0.318 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thaps8654 HSF 53 150

Links

Other HSF family TFs
Other Thalassiosira pseudonana TFs

43 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Thaps264838 Thalassiosira pseudonana Thaps264838 N 0.429
Thaps264847 Thalassiosira pseudonana Thaps264847 N 0.425
Thaps22932 Thalassiosira pseudonana Thaps22932 N 0.362
Phatr3_J48667 Phaeodactylum tricornutum Phatr3_J48667 N 0.358
Thaps264072 Thalassiosira pseudonana Thaps264072 N 0.350
gw1.22.133.1 Fragilariopsis cylindrus gw1.22.133.1 N 0.350
Phatr3_EG02471 Phaeodactylum tricornutum Phatr3_EG02471 N 0.348
Phatr3_J43364 Phaeodactylum tricornutum Phatr3_J43364 N 0.346
Thaps263978 Thalassiosira pseudonana Thaps263978 N 0.343
gw1.2.1206.1 Fragilariopsis cylindrus gw1.2.1206.1 N 0.342
Thaps269194 Thalassiosira pseudonana Thaps269194 N 0.341
fgenesh2_kg.1_#_319_#_2595_1_CCUX_EXTA Fragilariopsis cylindrus fgenesh2_kg.1_#_319_#_2595_1_CCUX_EXTA N 0.341
Phatr3_J44586 Phaeodactylum tricornutum Phatr3_J44586 N 0.339
Thaps11623 Thalassiosira pseudonana Thaps11623 N 0.336
e_gw1.2.349.1 Fragilariopsis cylindrus e_gw1.2.349.1 N 0.333
Thaps22570 Thalassiosira pseudonana Thaps22570 I 0.332
CAOG_06646 Capsaspora owczarzaki CAOG_06646 I 0.331
Phatr3_J39785 Phaeodactylum tricornutum Phatr3_J39785 N 0.331
Phatr3_J44917 Phaeodactylum tricornutum Phatr3_J44917 N 0.331
SU7_1143 Saccharomyces arboricola SU7_1143 I 0.331
Thaps9607 Thalassiosira pseudonana Thaps9607 N 0.328
HSF1 Saccharomyces cerevisiae YGL073W D 0.328
7859_YGL073W Saccharomyces mikatae 7859_YGL073W I 0.328
8607_YGL073W Saccharomyces paradoxus 8607_YGL073W I 0.328
PDE_09961 Penicillium oxalicum PDE_09961 I 0.325
Thaps23803 Thalassiosira pseudonana Thaps23803 N 0.325
Thaps268064 Thalassiosira pseudonana Thaps268064 N 0.325
Thaps23801 Thalassiosira pseudonana Thaps23801 N 0.324
Thaps7395 Thalassiosira pseudonana Thaps7395 N 0.324
Phatr3_J48361 Phaeodactylum tricornutum Phatr3_J48361 N 0.323
HSF2 Phaeodactylum tricornutum Phatr3_J55070 N 0.323
gw1.1.2017.1 Fragilariopsis cylindrus gw1.1.2017.1 N 0.323
Phatr3_J50481 Phaeodactylum tricornutum Phatr3_J50481 N 0.322
Thaps23991 Thalassiosira pseudonana Thaps23991 N 0.322
CIMG_06399 Coccidioides immitis CIMG_06399 I 0.321
CPC735_029030 Coccidioides posadasii CPC735_029030 I 0.321
Phatr3_J49594 Phaeodactylum tricornutum Phatr3_J49594 I 0.321
Thaps10803 Thalassiosira pseudonana Thaps10803 N 0.321
UREG_04004 Uncinocarpus reesii UREG_04004 I 0.321
Phatr3_Jdraft1650 Phaeodactylum tricornutum Phatr3_Jdraft1650 N 0.320
Phatr3_EG01933 Phaeodactylum tricornutum Phatr3_EG01933 N 0.319
PV09_00139 Verruconis gallopava PV09_00139 I 0.319
Thaps7394 Thalassiosira pseudonana Thaps7394 N 0.318