CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
fgenesh1_pg.C_scaffold_17000111
(
Phytophthora capsici
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
fgenesh1_pg.C_scaffold_17000111
T243558_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_17000111
HSF
1
86
MLQNEDQRILSWSVDGSHFQVYDVPRLETEVLRKYFKHGKFSSFQRQLNNFGFHKWTKTRASVATFSHEVLVRCHLSQLDTLAAQM
Links
Other
HSF
family TFs
Other
Phytophthora capsici
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Phyra75440
Phytophthora ramorum
Phyra75440
N
0.528
Physo142190
Phytophthora sojae
Physo142190
N
0.526
Physo142191
Phytophthora sojae
Physo142191
N
0.526
F443_15764
Phytophthora parasitica
F443_15764
N
0.511
PITG_04700
Phytophthora infestans
PITG_04700
N
0.508
Physo142188
Phytophthora sojae
Physo142188
N
0.507
fgenesh_scip_prom.28083.12007
Phytophthora lateralis
fgenesh_scip_prom.28083.12007
N
0.506
fgenesh_scip_prom.46568.9529
Phytophthora kernoviae
fgenesh_scip_prom.46568.9529
N
0.488
Physo142192
Phytophthora sojae
Physo142192
N
0.458
F443_15766
Phytophthora parasitica
F443_15766
N
0.457
maker-pir_contig_1338-fgenesh-gene-0.2
Pythium irregulare
maker-pir_contig_1338-fgenesh-gene-0.2
N
0.448
e_gw1.457.7.1
Phytophthora capsici
e_gw1.457.7.1
N
0.445
PYU1_G007486
Pythium ultimum
PYU1_G007486
N
0.429
PYU1_G007487
Pythium ultimum
PYU1_G007487
N
0.424
PITG_04694
Phytophthora infestans
PITG_04694
N
0.421
maker-pir_contig_636-snap-gene-0.12
Pythium irregulare
maker-pir_contig_636-snap-gene-0.12
N
0.419
fgenesh_scip_prom.28083.5336
Phytophthora lateralis
fgenesh_scip_prom.28083.5336
N
0.417
Phyra85808
Phytophthora ramorum
Phyra85808
N
0.417
fgenesh1_pm.C_scaffold_10000249
Phytophthora capsici
fgenesh1_pm.C_scaffold_10000249
N
0.417
F443_08033
Phytophthora parasitica
F443_08033
N
0.416
Physo138014
Phytophthora sojae
Physo138014
N
0.416
PITG_20387
Phytophthora infestans
PITG_20387
N
0.416
maker-pve_contig_563-fgenesh-gene-0.8
Pythium vexans
maker-pve_contig_563-fgenesh-gene-0.8
N
0.412
fgenesh_scip_prom.46568.6540
Phytophthora kernoviae
fgenesh_scip_prom.46568.6540
N
0.411
F443_15765
Phytophthora parasitica
F443_15765
N
0.409
maker-pag1_scaffold_526-fgenesh-gene-0.3
Pythium aphanidermatum
maker-pag1_scaffold_526-fgenesh-gene-0.3
N
0.409
maker-pag1_scaffold_539-snap-gene-0.8
Pythium aphanidermatum
maker-pag1_scaffold_539-snap-gene-0.8
N
0.401
maker-pag1_scaffold_785-snap-gene-0.4
Pythium aphanidermatum
maker-pag1_scaffold_785-snap-gene-0.4
N
0.401
ALNC14_092860
Albugo laibachii
ALNC14_092860
N
0.392
maker-pve_contig_1305-fgenesh-gene-0.0
Pythium vexans
maker-pve_contig_1305-fgenesh-gene-0.0
N
0.386
maker-piw_contig_10342-snap-gene-0.1
Pythium iwayamai
maker-piw_contig_10342-snap-gene-0.1
N
0.383
maker-par_contig_2316-fgenesh-gene-0.0
Pythium arrhenomanes
maker-par_contig_2316-fgenesh-gene-0.0
N
0.382
maker-pir_contig_4474-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_4474-fgenesh-gene-0.0
N
0.378
ALNC14_110220
Albugo laibachii
ALNC14_110220
N
0.371
ALNC14_036480
Albugo laibachii
ALNC14_036480
N
0.349
SPRG_11849
Saprolegnia parasitica
SPRG_11849
N
0.324