CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDK_20s1831761g001
(
Phoenix dactylifera
)
HSF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00447 (HSF_DNA-bind)
IPR000232
PDK_20s1831761g001
T243602_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HSFA6B
M06941_2.00
Arabidopsis thaliana
RGAASNTTCTAGA
TCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFA6B_colamp_a
0.462
0.770
HSFA6B
M06942_2.00
Arabidopsis thaliana
RGAABNTTCTRGAAN
NTTCYAGAANVTTCY
Dap-seq
OMalley et al.(2016)
HSFA6B_col
0.462
0.770
HSFA4A
M06947_2.00
Arabidopsis thaliana
NNNRGAABBTTCTAGAANN
NNTTCTAGAAVVTTCYNNN
Dap-seq
OMalley et al.(2016)
HSF21_col_a
0.436
0.678
HSFA1E
M06939_2.00
Arabidopsis thaliana
RGAANNTTCTAGA
TCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSFA1E_col_a
0.435
0.782
HSFA1E
M06940_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFA1E_colamp_a
0.435
0.782
HSFA6A
M06950_2.00
Arabidopsis thaliana
GAASNTTCTAGAANNW
WNNTTCTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFA6A_col_a
0.430
0.690
HSFA6A
M06951_2.00
Arabidopsis thaliana
GAASNTTCTAGAA
TTCTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFA6A_colamp_a
0.430
0.690
HSFA1B
M06948_2.00
Arabidopsis thaliana
GAANNTTCTAGA
TCTAGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF3_col_a
0.411
0.770
HSFA1B
M06949_2.00
Arabidopsis thaliana
TTCYRG
CYRGAA
Dap-seq
OMalley et al.(2016)
HSF3_colamp_a
0.411
0.770
HSFB2A
M00869_2.00
Arabidopsis thaliana
NNNNNTTCB
VGAANNNNN
PBM
Franco-Zorrilla et al.(2014)
HSFB2A
0.392
0.621
HSFB2A
M06952_2.00
Arabidopsis thaliana
GAANNTTCYAGA
TCTRGAANNTTC
Dap-seq
OMalley et al.(2016)
HSF6_col_a
0.392
0.621
HSFB4
M06936_2.00
Arabidopsis thaliana
RGAASNTTCTAGAAN
NTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFB4_col_a
0.390
0.678
HSFC1
M00868_2.00
Arabidopsis thaliana
NDTCBNNN
NNNVGAHN
PBM
Franco-Zorrilla et al.(2014)
HSFC1
0.389
0.690
HSFC1
M06943_2.00
Arabidopsis thaliana
GAASNTTCTAG
CTAGAANSTTC
Dap-seq
OMalley et al.(2016)
HSFC1_col_a
0.389
0.690
HSFC1
M06944_2.00
Arabidopsis thaliana
RGAASNTTCTAGAANVW
WBNTTCTAGAANSTTCY
Dap-seq
OMalley et al.(2016)
HSFC1_colamp_a
0.389
0.690
HSFB2B
M06945_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_col_a
0.385
0.644
HSFB2B
M06946_2.00
Arabidopsis thaliana
RGAANNTTCTAGAA
TTCTAGAANNTTCY
Dap-seq
OMalley et al.(2016)
HSF7_colamp_a
0.385
0.644
HSFB3
M06937_2.00
Arabidopsis thaliana
RRAANMWTCTAGAAV
BTTCTAGAWKNTTYY
Dap-seq
OMalley et al.(2016)
HSFB3_col_a
0.379
0.644
HSFB3
M06938_2.00
Arabidopsis thaliana
AABSTTCTAGAAN
NTTCTAGAASVTT
Dap-seq
OMalley et al.(2016)
HSFB3_colamp_a
0.379
0.644
For this family, TFs with SR scores >
0.318
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PDK_20s1831761g001
HSF
12
102
FLNKTYDMVDDPKTDRVISWSSTNNSFVVWDPATFAMTLLPRYFKHGNFSSFVRQLNTYGFRKVDPDTWEFANEGFLRGQRHLLKTIKRRK
Links
Other
HSF
family TFs
Other
Phoenix dactylifera
TFs
1453 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000010576
Ailuropoda melanoleuca
ENSAMEG00000010576
I
ENSBTAP00000007323-D1
Bos grunniens
ENSBTAP00000007323-D1
I
ZNF205
Bos taurus
ENSBTAG00000005572
I
ZNF205
Callithrix jacchus
ENSCJAG00000015546
I
ZNF205
Canis familiaris
ENSCAFG00000023869
I
ENSCSAG00000010150
Chlorocebus sabaeus
ENSCSAG00000010150
I
ZNF205
Dasypus novemcinctus
ENSDNOG00000037994
I
ENSETEG00000002476
Echinops telfairi
ENSETEG00000002476
I
ZNF205
Equus caballus
ENSECAG00000009869
I
ZNF205
Erinaceus europaeus
ENSEEUG00000010049
I
ZNF205
Felis catus
ENSFCAG00000026028
I
ZNF205
Gorilla gorilla
ENSGGOG00000012036
I
ZNF205
Homo sapiens
ENSG00000122386
D
ENSSTOG00000003803
Ictidomys tridecemlineatus
ENSSTOG00000003803
I
ZNF205
Loxodonta africana
ENSLAFG00000021564
I
ENSP00000219091
Macaca fascicularis
ENSP00000219091
I
ZNF205
Macaca mulatta
ENSMMUG00000009487
I
ENSMEUG00000004328
Macropus eugenii
ENSMEUG00000004328
I
ZNF205
Microcebus murinus
ENSMICG00000009089
I
ENSMPUG00000015184
Mustela putorius furo
ENSMPUG00000015184
I
Zfp13
Mus musculus
ENSMUSG00000062012
I
Myotis_brandtii_ZNF205_10028065
Myotis brandtii
Myotis_brandtii_ZNF205_10028065
I
ENSNLEG00000009600
Nomascus leucogenys
ENSNLEG00000009600
I
ZNF205
Ochotona princeps
ENSOPRG00000005820
I
ZNF205
Otolemur garnettii
ENSOGAG00000003693
I
ENSOARG00000001319
Ovis aries
ENSOARG00000001319
I
ZNF205
Pan troglodytes
ENSPTRG00000007686
I
ENSPANG00000024398
Papio anubis
ENSPANG00000024398
I
ENSPPYG00000007034
Pongo abelii
ENSPPYG00000007034
I
ZNF205
Pteropus vampyrus
ENSPVAG00000001475
I
Zfp13
Rattus norvegicus
ENSRNOG00000003455
I
ZNF205
Sorex araneus
ENSSARG00000006551
I
ZNF205
Sus scrofa
ENSSSCG00000029375
I