irf6 (Oryzias latipes)
IRF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00605 (IRF) IPR001346 ENSORLG00000000511 T244291_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IRF6
M02254_2.00 		Meleagris gallopavo
NRNCGAWACY
RGTWTCGNYN		 PBM
Weirauch et al.(2014)
pTH9210 		0.867 0.867
IRF6
M02253_2.00 		Gallus gallus
NNMCNAAWNN
NNWTTNGKNN		 PBM
Weirauch et al.(2014)
pTH9178 		0.857 0.857
Irf6
M00176_2.00 		Mus musculus
NNNHGADASN
NSTHTCDNNN		 PBM
Badis et al.(2009)
Irf6_3803 		0.838 0.838
irf6.2
M02259_2.00 		Xenopus tropicalis
NVNHGAWACH
DGTWTCDNBN		 PBM
Weirauch et al.(2014)
pTH9302 		0.838 0.838
IRF6
M05527_2.00 		Homo sapiens
RGTWTCGNNNNNNYGAWACY
RGTWTCRNNNNNNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_HT-SELEX 		0.838 0.838
IRF6
M05529_2.00 		Homo sapiens
ACCGAAACT
AGTTTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_HT-SELEX 		0.838 0.838
IRF6
M05528_2.00 		Homo sapiens
RGTWTCGNHNNDNYGAWACY
RGTWTCRNHNNDNCGAWACY		 SELEX
Yin et al.(2017)
IRF6_eDBD_Methyl-HT-SELEX 		0.838 0.838
IRF6
M05530_2.00 		Homo sapiens
ACCGAWACY
RGTWTCGGT		 SELEX
Yin et al.(2017)
IRF6_FL_Methyl-HT-SELEX 		0.838 0.838
irf5.L
M02260_2.00 		Xenopus laevis
VNCGADACHN
NDGTHTCGNB		 PBM
Weirauch et al.(2014)
pTH9367 		0.762 0.762
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSORLP00000000629 IRF 16 121

Links

Other IRF family TFs
Other Oryzias latipes TFs

92 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
irf6 Takifugu rubripes ENSTRUG00000006951 I 0.962
irf6 Gasterosteus aculeatus ENSGACG00000000990 I 0.943
irf6 Tetraodon nigroviridis ENSTNIG00000014635 I 0.943
ENSONIG00000018961 Oreochromis niloticus ENSONIG00000018961 I 0.924
ENSPFOG00000005876 Poecilia formosa ENSPFOG00000005876 I 0.924
ENSXMAG00000007143 Xiphophorus maculatus ENSXMAG00000007143 I 0.924
ENSGMOG00000007988 Gadus morhua ENSGMOG00000007988 I 0.914
ENSLOCG00000011297 Lepisosteus oculatus ENSLOCG00000011297 I 0.895
ENSPFOG00000014077 Poecilia formosa ENSPFOG00000014077 I 0.886
ENSAMXG00000004616 Astyanax mexicanus ENSAMXG00000004616 I 0.876
ENSAPLG00000009319 Anas platyrhynchos ENSAPLG00000009319 I 0.867
IRF6 Meleagris gallopavo ENSMGAG00000004431 D 0.867
IRF6 Taeniopygia guttata ENSTGUG00000001485 I 0.867
Afo_R001981 Aptenodytes forsteri Afo_R001981 I 0.867
Alligator_sinensis_CCG003696.1 Alligator sinensis Alligator_sinensis_CCG003696.1 I 0.867
irf6 Danio rerio ENSDARG00000101986 I 0.857
IRF6 Gallus gallus ENSGALG00000001405 D 0.857
ENSLACG00000018600 Latimeria chalumnae ENSLACG00000018600 I 0.857
ENSPSIG00000003597 Pelodiscus sinensis ENSPSIG00000003597 I 0.857
Alligator_sinensis_CCG015719.1 Alligator sinensis Alligator_sinensis_CCG015719.1 I 0.857
IRF6 Anolis carolinensis ENSACAG00000005931 I 0.848
ENSMEUG00000014941 Macropus eugenii ENSMEUG00000014941 I 0.848
IRF6 Monodelphis domestica ENSMODG00000002539 I 0.848
IRF6 Ornithorhynchus anatinus ENSOANG00000013718 I 0.848
Cmyd_10010684 Chelonia mydas Cmyd_10010684 I 0.848
ENSAMEG00000017984 Ailuropoda melanoleuca ENSAMEG00000017984 I 0.838
IRF6 Bos taurus ENSBTAG00000002849 I 0.838
IRF6 Canis familiaris ENSCAFG00000011971 I 0.838
IRF6 Choloepus hoffmanni ENSCHOG00000010399 I 0.838
IRF6 Callithrix jacchus ENSCJAG00000015032 I 0.838
IRF6 Cavia porcellus ENSCPOG00000023829 I 0.838
ENSCSAG00000015263 Chlorocebus sabaeus ENSCSAG00000015263 I 0.838
IRF6 Dasypus novemcinctus ENSDNOG00000001694 I 0.838
Irf6 Dipodomys ordii ENSDORG00000008891 I 0.838
IRF6 Equus caballus ENSECAG00000007482 I 0.838
IRF6 Echinops telfairi ENSETEG00000008368 I 0.838
IRF6 Felis catus ENSFCAG00000015138 I 0.838
IRF6 Homo sapiens ENSG00000117595 D 0.838
IRF6 Gorilla gorilla ENSGGOG00000006214 I 0.838
IRF6 Myotis lucifugus ENSMLUG00000004509 I 0.838
IRF6 Macaca mulatta ENSMMUG00000022065 I 0.838
ENSMPUG00000003106 Mustela putorius furo ENSMPUG00000003106 I 0.838
Irf6 Mus musculus ENSMUSG00000026638 D 0.838
ENSNLEG00000001962 Nomascus leucogenys ENSNLEG00000001962 I 0.838
ENSOARG00000012720 Ovis aries ENSOARG00000012720 I 0.838
IRF6 Oryctolagus cuniculus ENSOCUG00000004035 I 0.838
IRF6 Otolemur garnettii ENSOGAG00000010708 I 0.838
ENSPANG00000011328 Papio anubis ENSPANG00000011328 I 0.838
IRF6 Procavia capensis ENSPCAG00000006456 I 0.838
ENSPPYG00000000253 Pongo abelii ENSPPYG00000000253 I 0.838
IRF6 Pan troglodytes ENSPTRG00000001941 I 0.838
IRF6 Pteropus vampyrus ENSPVAG00000004865 I 0.838
Irf6 Rattus norvegicus ENSRNOG00000005082 I 0.838
IRF6 Sus scrofa ENSSSCG00000015612 I 0.838
ENSTSYG00000010982 Tarsius syrichta ENSTSYG00000010982 I 0.838
IRF6 Tursiops truncatus ENSTTRG00000001121 I 0.838
IRF6 Vicugna pacos ENSVPAG00000010247 I 0.838
ENSP00000349770-D2 Bos grunniens ENSP00000349770-D2 I 0.838
ENSP00000355988 Macaca fascicularis ENSP00000355988 I 0.838
Myotis_brandtii_IRF6_10012270 Myotis brandtii Myotis_brandtii_IRF6_10012270 I 0.838
Pvit_15428 Pogona vitticeps Pvit_15428 I 0.838
irf6.2 Xenopus tropicalis XB-GENE-5910331 D 0.838
irf6.2.L Xenopus laevis XB-GENE-5910427 I 0.838
irf6 Xenopus tropicalis XB-GENE-876410 I 0.838
irf6.S Xenopus laevis XB-GENE-876421 I 0.838
IRF6 Loxodonta africana ENSLAFG00000001374 I 0.829
ENSSTOG00000028204 Ictidomys tridecemlineatus ENSSTOG00000028204 I 0.829
IRF6 Microcebus murinus ENSMICG00000001233 I 0.817
ENSOARG00000020948 Ovis aries ENSOARG00000020948 I 0.810
ENSPFOG00000013528 Poecilia formosa ENSPFOG00000013528 I 0.790
ENSXMAG00000013056 Xiphophorus maculatus ENSXMAG00000013056 I 0.790
irf5 Takifugu rubripes ENSTRUG00000000641 I 0.781
ENSONIG00000007600 Oreochromis niloticus ENSONIG00000007600 I 0.771
Alligator_sinensis_CCG004564.1 Alligator sinensis Alligator_sinensis_CCG004564.1 I 0.771
Pvit_14327 Pogona vitticeps Pvit_14327 I 0.771
ENSLACG00000005750 Latimeria chalumnae ENSLACG00000005750 I 0.762
irf5 Tetraodon nigroviridis ENSTNIG00000003346 I 0.762
irf5.L Xenopus laevis XB-GENE-998629 D 0.762
ENSGMOG00000007264 Gadus morhua ENSGMOG00000007264 I 0.760
irf5 Gasterosteus aculeatus ENSGACG00000000695 I 0.752
IRF6 Ochotona princeps ENSOPRG00000014295 I 0.752
ENSLOCG00000015563 Lepisosteus oculatus ENSLOCG00000015563 I 0.743
irf5 Xenopus tropicalis XB-GENE-998624 I 0.743
irf5 Danio rerio ENSDARG00000045681 I 0.733
Cmyd_10002838 Chelonia mydas Cmyd_10002838 I 0.733
Ogr12956 Ophisaurus gracilis Ogr12956 I 0.733
ENSAPLG00000006203 Anas platyrhynchos ENSAPLG00000006203 I 0.724
IRF5 Homo sapiens ENSG00000128604 D 0.722
ENSMEUG00000002435 Macropus eugenii ENSMEUG00000002435 I 0.714
IRF5 Monodelphis domestica ENSMODG00000014710 I 0.714
IRF5 Ornithorhynchus anatinus ENSOANG00000011449 I 0.714
ENSSHAG00000006683 Sarcophilus harrisii ENSSHAG00000006683 I 0.714