SCP (Arabidopsis lyrata)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 fgenesh1_pg.C_scaffold_5001275 T245148_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_5001275 LOB 36 134

Links

Other LOB family TFs
Other Arabidopsis lyrata TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LBD27 Arabidopsis thaliana AT3G47870 N 0.980
Cagra.13768s0012 Capsella grandiflora Cagra.13768s0012 N 0.980
Carubv10018376m.g Capsella rubella Carubv10018376m.g N 0.980
Bo3g135950 Brassica oleracea Bo3g135950 N 0.929
Bra018102 Brassica rapa Bra018102 N 0.929
Thhalv10011007m.g Eutrema salsugineum Thhalv10011007m.g N 0.919
Bostr.18473s0162 Boechera stricta Bostr.18473s0162 N 0.889
Bo1g072490 Brassica oleracea Bo1g072490 N 0.869
evm.TU.supercontig_17.185 Carica papaya evm.TU.supercontig_17.185 N 0.737