GLYMA20G24950 (Glycine max)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 GLYMA20G24950 T245260_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA20G24950.1 LOB 4 107

Links

Other LOB family TFs
Other Glycine max TFs

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA08G31143 Glycine max GLYMA08G31143 N 0.808
TCM_009888 Theobroma cacao TCM_009888 N 0.798
MTR_6g453130 Medicago truncatula MTR_6g453130 N 0.788
Ca_05488 Cicer arietinum Ca_05488 N 0.788
MTR_1g110840 Medicago truncatula MTR_1g110840 N 0.778
POPTR_0010s13480 Populus trichocarpa POPTR_0010s13480 N 0.778
cassava38982.m1 Manihot esculenta cassava38982.m1 N 0.778
MTR_6g054150 Medicago truncatula MTR_6g054150 N 0.768
POPTR_0008s11950 Populus trichocarpa POPTR_0008s11950 N 0.768
Ciclev10013705m.g Citrus clementina Ciclev10013705m.g N 0.768
orange1.1g022591m.g Citrus sinensis orange1.1g022591m.g N 0.768
GSMUA_Achr3G29520_001 Musa acuminata GSMUA_Achr3G29520_001 N 0.758
GSMUA_Achr4G06820_001 Musa acuminata GSMUA_Achr4G06820_001 N 0.758
PRUPE_ppa009213mg Prunus persica PRUPE_ppa009213mg N 0.758
Cla020705 Citrullus lanatus Cla020705 N 0.758
27524.m000293 Ricinus communis 27524.m000293 N 0.758
cassava43296.valid.m1 Manihot esculenta cassava43296.valid.m1 N 0.758
Cucsa.283560 Cucumis sativus Cucsa.283560 N 0.758
Bostr.26959s0040 Boechera stricta Bostr.26959s0040 N 0.758
Cagra.3364s0006 Capsella grandiflora Cagra.3364s0006 N 0.758
Carubv10022391m.g Capsella rubella Carubv10022391m.g N 0.758
evm.TU.supercontig_1.42 Carica papaya evm.TU.supercontig_1.42 N 0.758
evm.TU.supercontig_282.15 Carica papaya evm.TU.supercontig_282.15 N 0.758
evm.TU.supercontig_3.514 Carica papaya evm.TU.supercontig_3.514 N 0.758
gene03741-v1.0-hybrid Fragaria vesca gene03741-v1.0-hybrid N 0.758
Gorai.008G056000 Gossypium raimondii Gorai.008G056000 N 0.758
PK03169.1 Cannabis sativa PK03169.1 N 0.758
AMTR_s00079p00088960 Amborella trichopoda AMTR_s00079p00088960 N 0.747
LBD42 Arabidopsis thaliana AT1G68510 N 0.747
LBD42 Arabidopsis lyrata fgenesh2_kg.2__1100__AT1G68510.1 N 0.747
GSMUA_Achr4G13790_001 Musa acuminata GSMUA_Achr4G13790_001 N 0.747
POPTR_0004s09920 Populus trichocarpa POPTR_0004s09920 N 0.747
POPTR_0012s05340 Populus trichocarpa POPTR_0012s05340 N 0.747
PRUPE_ppa011233mg Prunus persica PRUPE_ppa011233mg N 0.747
Sb01g032580 Sorghum bicolor Sb01g032580 N 0.747
TCM_019459 Theobroma cacao TCM_019459 N 0.747
Cla007208 Citrullus lanatus Cla007208 N 0.747
Pm029059 Prunus mume Pm029059 N 0.747
cassava6185.valid.m1 Manihot esculenta cassava6185.valid.m1 N 0.747
Cucsa.031350 Cucumis sativus Cucsa.031350 N 0.747
Pavir.Ea01295 Panicum virgatum Pavir.Ea01295 N 0.747
SapurV1A.0078s0410 Salix purpurea SapurV1A.0078s0410 N 0.747
SapurV1A.0851s0010 Salix purpurea SapurV1A.0851s0010 N 0.747
BGIOSGA001546 Oryza indica BGIOSGA001546 N 0.737
Bra004315 Brassica rapa Bra004315 N 0.737
GSMUA_Achr9G21360_001 Musa acuminata GSMUA_Achr9G21360_001 N 0.737
LPERR01G15290 Leersia perrieri LPERR01G15290 N 0.737
MTR_6g054080 Medicago truncatula MTR_6g054080 N 0.737
MTR_7g007010 Medicago truncatula MTR_7g007010 N 0.737
OBART01G17510 Oryza barthii OBART01G17510 N 0.737
OGLUM01G20320 Oryza glumaepatula OGLUM01G20320 N 0.737
OMERI01G16320 Oryza meridionalis OMERI01G16320 N 0.737
ONIVA01G19320 Oryza nivara ONIVA01G19320 N 0.737
OPUNC01G18000 Oryza punctata OPUNC01G18000 N 0.737
ORUFI01G19440 Oryza rufipogon ORUFI01G19440 N 0.737
OS01G0511000 Oryza sativa OS01G0511000 N 0.737
POPTR_0005s15670 Populus trichocarpa POPTR_0005s15670 N 0.737
VIT_14s0006g02950 Vitis vinifera VIT_14s0006g02950 N 0.737
Aquca_026_00293 Aquilegia coerulea Aquca_026_00293 N 0.737
Carubv10002654m.g Capsella rubella Carubv10002654m.g N 0.737
Ciclev10016422m.g Citrus clementina Ciclev10016422m.g N 0.737
gene10300-v1.0-hybrid Fragaria vesca gene10300-v1.0-hybrid N 0.737
Gorai.002G217800 Gossypium raimondii Gorai.002G217800 N 0.737
Gorai.005G190300 Gossypium raimondii Gorai.005G190300 N 0.737
MDP0000136037 Malus domestica MDP0000136037 N 0.737
MDP0000233303 Malus domestica MDP0000233303 N 0.737
orange1.1g045357m.g Citrus sinensis orange1.1g045357m.g N 0.737
Pavir.Eb02390 Panicum virgatum Pavir.Eb02390 N 0.737
Pavir.J01483 Panicum virgatum Pavir.J01483 N 0.737
SapurV1A.0315s0090 Salix purpurea SapurV1A.0315s0090 N 0.737
Thhalv10019494m.g Eutrema salsugineum Thhalv10019494m.g N 0.737
Bo6g106960 Brassica oleracea Bo6g106960 N 0.727
GLYMA08G48040 Glycine max GLYMA08G48040 N 0.727
GLYMA13G07590 Glycine max GLYMA13G07590 N 0.727
GRMZM2G060544 Zea mays GRMZM2G060544 N 0.727
GSMUA_Achr4G03700_001 Musa acuminata GSMUA_Achr4G03700_001 N 0.727
GSMUA_Achr9G00580_001 Musa acuminata GSMUA_Achr9G00580_001 N 0.727
GSMUA_AchrUn_randomG00460_001 Musa acuminata GSMUA_AchrUn_randomG00460_001 N 0.727
28207.m000107 Ricinus communis 28207.m000107 N 0.727
cassava60.valid.m1 Manihot esculenta cassava60.valid.m1 N 0.727
Bostr.2902s0344 Boechera stricta Bostr.2902s0344 N 0.727
Carubv10000015m.g Capsella rubella Carubv10000015m.g N 0.727
Eucgr.J01501 Eucalyptus grandis Eucgr.J01501 N 0.727
Pavir.J00526 Panicum virgatum Pavir.J00526 N 0.727
SapurV1A.0079s0150 Salix purpurea SapurV1A.0079s0150 N 0.727
chr1.LjT23D08.90.nc Lotus japonicus chr1.LjT23D08.90.nc N 0.727
LBD40 Arabidopsis lyrata Al_scaffold_0002_1337 N 0.717
LBD40 Arabidopsis thaliana AT1G67100 N 0.717
Bo3g055690 Brassica oleracea Bo3g055690 N 0.717
Bra021433 Brassica rapa Bra021433 N 0.717
GLYMA18G53440 Glycine max GLYMA18G53440 N 0.717
GLYMA19G06280 Glycine max GLYMA19G06280 N 0.717
GSMUA_Achr1G20970_001 Musa acuminata GSMUA_Achr1G20970_001 N 0.717
PGSC0003DMG400005719 Solanum tuberosum PGSC0003DMG400005719 N 0.717
Sb09g030780 Sorghum bicolor Sb09g030780 N 0.717
Si022660m.g Setaria italica Si022660m.g N 0.717
Solyc03g119530.2 Solanum lycopersicum Solyc03g119530.2 N 0.717
TCM_012338 Theobroma cacao TCM_012338 N 0.717
VIT_01s0011g03540 Vitis vinifera VIT_01s0011g03540 N 0.717
VIT_17s0000g03720 Vitis vinifera VIT_17s0000g03720 N 0.717
mgf010898m Mimulus guttatus mgf010898m N 0.717
Cagra.6164s0006 Capsella grandiflora Cagra.6164s0006 N 0.717
Cagra.6845s0054 Capsella grandiflora Cagra.6845s0054 N 0.717
Carubv10021721m.g Capsella rubella Carubv10021721m.g N 0.717
Ciclev10022068m.g Citrus clementina Ciclev10022068m.g N 0.717
Gorai.006G061200 Gossypium raimondii Gorai.006G061200 N 0.717
Lus10028470.g Linum usitatissimum Lus10028470.g N 0.717
orange1.1g038007m.g Citrus sinensis orange1.1g038007m.g N 0.717
Thhalv10019048m.g Eutrema salsugineum Thhalv10019048m.g N 0.717
LjSGA_023437.1 Lotus japonicus LjSGA_023437.1 N 0.717
Sb09g025710 Sorghum bicolor Sb09g025710 N 0.711
AC234149.1_FG002 Zea mays AC234149.1_FG002 N 0.707
BGIOSGA002703 Oryza indica BGIOSGA002703 N 0.707
Bo1g156310 Brassica oleracea Bo1g156310 N 0.707
Bo2g055410 Brassica oleracea Bo2g055410 N 0.707
BRADI4G16740 Brachypodium distachyon BRADI4G16740 N 0.707
BRADI4G16750 Brachypodium distachyon BRADI4G16750 N 0.707
GRMZM2G073044 Zea mays GRMZM2G073044 N 0.707
GRMZM2G386674 Zea mays GRMZM2G386674 N 0.707
LPERR01G01830 Leersia perrieri LPERR01G01830 N 0.707
MTR_6g018270 Medicago truncatula MTR_6g018270 N 0.707
OB01G11830 Oryza brachyantha OB01G11830 N 0.707
OBART01G01940 Oryza barthii OBART01G01940 N 0.707
OGLUM01G02100 Oryza glumaepatula OGLUM01G02100 N 0.707
OMERI01G01380 Oryza meridionalis OMERI01G01380 N 0.707
ONIVA01G02110 Oryza nivara ONIVA01G02110 N 0.707
OPUNC01G01670 Oryza punctata OPUNC01G01670 N 0.707
ORGLA01G0016600 Oryza glaberrima ORGLA01G0016600 N 0.707
ORUFI01G02010 Oryza rufipogon ORUFI01G02010 N 0.707
PGSC0003DMG400012653 Solanum tuberosum PGSC0003DMG400012653 N 0.707
Sb03g007270 Sorghum bicolor Sb03g007270 N 0.707
Solyc02g085910.2 Solanum lycopersicum Solyc02g085910.2 N 0.707
Ca_22996 Cicer arietinum Ca_22996 N 0.707
mgf011656m Mimulus guttatus mgf011656m N 0.707
Bostr.26959s0198 Boechera stricta Bostr.26959s0198 N 0.707
Eucgr.G02321 Eucalyptus grandis Eucgr.G02321 N 0.707
Eucgr.K02222 Eucalyptus grandis Eucgr.K02222 N 0.707
Thhalv10021328m.g Eutrema salsugineum Thhalv10021328m.g N 0.707