LPERR03G03460 (Leersia perrieri)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 LPERR03G03460 T245391_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD16
M00870_2.00 		Arabidopsis thaliana
DNHHYVCGG
CCGBRDDNH		 PBM
Franco-Zorrilla et al.(2014)
LBD16 		0.717 0.717
LBD16
M06958_2.00 		Arabidopsis thaliana
SCGGAAAWNVCGSMR
YKSCGBNWTTTCCGS		 Dap-seq
OMalley et al.(2016)
ASL18_col_a 		0.717 0.717
LBD16
M06959_2.00 		Arabidopsis thaliana
SCDBDWTTYVCGSHDN
NHDSCGBRAAWHVHGS		 Dap-seq
OMalley et al.(2016)
ASL18_colamp_a 		0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR03G03460.1 LOB 14 113

Links

Other LOB family TFs
Other Leersia perrieri TFs

150 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA011866 Oryza indica BGIOSGA011866 I 0.970
OB03G13880 Oryza brachyantha OB03G13880 I 0.970
OPUNC03G03510 Oryza punctata OPUNC03G03510 I 0.970
ORGLA03G0035800 Oryza glaberrima ORGLA03G0035800 I 0.970
OS03G0149000 Oryza sativa OS03G0149000 I 0.970
OBART03G03820 Oryza barthii OBART03G03820 I 0.933
OGLUM03G03700 Oryza glumaepatula OGLUM03G03700 I 0.933
ONIVA03G03570 Oryza nivara ONIVA03G03570 I 0.933
ORUFI03G03540 Oryza rufipogon ORUFI03G03540 I 0.933
GRMZM2G092483 Zea mays GRMZM2G092483 I 0.889
MLOC_10783 Hordeum vulgare MLOC_10783 N 0.889
Sb01g047000 Sorghum bicolor Sb01g047000 I 0.889
Si037727m.g Setaria italica Si037727m.g I 0.889
Traes_4AL_3BA1D51E2 Triticum aestivum Traes_4AL_3BA1D51E2 N 0.889
Traes_4BL_F71DE14F7 Triticum aestivum Traes_4BL_F71DE14F7 N 0.889
Traes_4BS_B43A99154 Triticum aestivum Traes_4BS_B43A99154 N 0.889
Pavir.J24246 Panicum virgatum Pavir.J24246 I 0.889
BRADI1G75120 Brachypodium distachyon BRADI1G75120 N 0.879
Traes_4DL_05F87867C Triticum aestivum Traes_4DL_05F87867C N 0.879
Pavir.Ib00282 Panicum virgatum Pavir.Ib00282 I 0.879
OLONG_020840 Oryza longistaminata OLONG_020840 N 0.869
OMERI07G01670 Oryza meridionalis OMERI07G01670 N 0.869
MLOC_61947 Hordeum vulgare MLOC_61947 I 0.783
MLOC_10784 Hordeum vulgare MLOC_10784 I 0.778
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I 0.778
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I 0.778
BRADI1G75110 Brachypodium distachyon BRADI1G75110 I 0.768
LPERR02G31040 Leersia perrieri LPERR02G31040 I 0.768
Traes_4AL_CAF4E16B5 Triticum aestivum Traes_4AL_CAF4E16B5 I 0.768
GRMZM2G075499 Zea mays GRMZM2G075499 I 0.747
OB02G44330 Oryza brachyantha OB02G44330 I 0.747
Sb04g037550 Sorghum bicolor Sb04g037550 I 0.747
Si019578m.g Setaria italica Si019578m.g I 0.747
Traes_6AL_D6045E37C Triticum aestivum Traes_6AL_D6045E37C I 0.747
Traes_6DL_850266B2A Triticum aestivum Traes_6DL_850266B2A I 0.747
TRIUR3_01477 Triticum urartu TRIUR3_01477 I 0.747
Pavir.Aa00097 Panicum virgatum Pavir.Aa00097 I 0.747
Pavir.J39638 Panicum virgatum Pavir.J39638 I 0.747
BGIOSGA005344 Oryza indica BGIOSGA005344 I 0.737
BGIOSGA011445 Oryza indica BGIOSGA011445 I 0.737
BRADI3G55680 Brachypodium distachyon BRADI3G55680 I 0.737
GRMZM2G092542 Zea mays GRMZM2G092542 I 0.737
GSMUA_Achr1G01360_001 Musa acuminata GSMUA_Achr1G01360_001 I 0.737
LPERR03G03470 Leersia perrieri LPERR03G03470 I 0.737
OB03G13890 Oryza brachyantha OB03G13890 I 0.737
OBART03G03830 Oryza barthii OBART03G03830 I 0.737
OGLUM02G38740 Oryza glumaepatula OGLUM02G38740 I 0.737
OMERI02G35350 Oryza meridionalis OMERI02G35350 I 0.737
OMERI07G01660 Oryza meridionalis OMERI07G01660 I 0.737
ONIVA02G40360 Oryza nivara ONIVA02G40360 I 0.737
ONIVA03G03580 Oryza nivara ONIVA03G03580 I 0.737
OPUNC03G03520 Oryza punctata OPUNC03G03520 I 0.737
ORGLA02G0327800 Oryza glaberrima ORGLA02G0327800 I 0.737
ORGLA03G0035900 Oryza glaberrima ORGLA03G0035900 I 0.737
ORUFI02G39110 Oryza rufipogon ORUFI02G39110 I 0.737
ORUFI03G03550 Oryza rufipogon ORUFI03G03550 I 0.737
OS02G0820500 Oryza sativa OS02G0820500 I 0.737
OS03G0149100 Oryza sativa OS03G0149100 I 0.737
Sb01g046990 Sorghum bicolor Sb01g046990 I 0.737
Si040019m.g Setaria italica Si040019m.g I 0.737
LBD16 Vitis vinifera VIT_07s0005g03030 I 0.737
Pavir.Ia04220 Panicum virgatum Pavir.Ia04220 I 0.737
Pavir.Ib00283 Panicum virgatum Pavir.Ib00283 I 0.737
Pavir.J03376 Panicum virgatum Pavir.J03376 I 0.737
MLOC_52276 Hordeum vulgare MLOC_52276 I 0.733
AC149818.2_FG009 Zea mays AC149818.2_FG009 I 0.727
GSMUA_Achr1G01350_001 Musa acuminata GSMUA_Achr1G01350_001 I 0.727
GSMUA_Achr1G06580_001 Musa acuminata GSMUA_Achr1G06580_001 I 0.727
GSMUA_AchrUn_randomG23710_001 Musa acuminata GSMUA_AchrUn_randomG23710_001 I 0.727
OPUNC02G34750 Oryza punctata OPUNC02G34750 I 0.727
Cla006088 Citrullus lanatus Cla006088 I 0.727
MDP0000131964 Malus domestica MDP0000131964 I 0.727
POPTR_0002s14990 Populus trichocarpa POPTR_0002s14990 I 0.721
LBD16 Arabidopsis thaliana AT2G42430 D 0.717
BGIOSGA026473 Oryza indica BGIOSGA026473 I 0.717
Bo4g016000 Brassica oleracea Bo4g016000 I 0.717
Bo4g191530 Brassica oleracea Bo4g191530 I 0.717
Bra004693 Brassica rapa Bra004693 I 0.717
LBD29 Arabidopsis lyrata fgenesh2_kg.5__2263__AT3G58190.1 I 0.717
GSMUA_Achr10G06700_001 Musa acuminata GSMUA_Achr10G06700_001 I 0.717
GSMUA_Achr4G25190_001 Musa acuminata GSMUA_Achr4G25190_001 I 0.717
GSMUA_AchrUn_randomG07730_001 Musa acuminata GSMUA_AchrUn_randomG07730_001 I 0.717
OB08G30680 Oryza brachyantha OB08G30680 I 0.717
OBART08G23860 Oryza barthii OBART08G23860 I 0.717
OGLUM08G25340 Oryza glumaepatula OGLUM08G25340 I 0.717
OLONG_010223 Oryza longistaminata OLONG_010223 I 0.717
OMERI08G18670 Oryza meridionalis OMERI08G18670 I 0.717
ONIVA09G01330 Oryza nivara ONIVA09G01330 I 0.717
OPUNC08G21770 Oryza punctata OPUNC08G21770 I 0.717
ORGLA08G0192400 Oryza glaberrima ORGLA08G0192400 I 0.717
ORUFI08G26340 Oryza rufipogon ORUFI08G26340 I 0.717
OS08G0563400 Oryza sativa OS08G0563400 I 0.717
PGSC0003DMG400009713 Solanum tuberosum PGSC0003DMG400009713 I 0.717
POPTR_0002s04200 Populus trichocarpa POPTR_0002s04200 I 0.717
LBD16 Arabidopsis lyrata scaffold_403099.1 I 0.717
VIT_07s0005g03020 Vitis vinifera VIT_07s0005g03020 I 0.717
Pm020629 Prunus mume Pm020629 I 0.717
cassava15612.m1 Manihot esculenta cassava15612.m1 I 0.717
cassava40664.m1 Manihot esculenta cassava40664.m1 I 0.717
Cucsa.053440 Cucumis sativus Cucsa.053440 I 0.717
Bostr.20903s0070 Boechera stricta Bostr.20903s0070 I 0.717
Bostr.25993s0538 Boechera stricta Bostr.25993s0538 I 0.717
Cagra.0686s0036 Capsella grandiflora Cagra.0686s0036 I 0.717
Cagra.2636s0029 Capsella grandiflora Cagra.2636s0029 I 0.717
Carubv10019250m.g Capsella rubella Carubv10019250m.g I 0.717
Carubv10025548m.g Capsella rubella Carubv10025548m.g I 0.717
Ciclev10024416m.g Citrus clementina Ciclev10024416m.g I 0.717
evm.TU.supercontig_50.43 Carica papaya evm.TU.supercontig_50.43 I 0.717
gene08250-v1.0-hybrid Fragaria vesca gene08250-v1.0-hybrid I 0.717
Gorai.004G073200 Gossypium raimondii Gorai.004G073200 I 0.717
Gorai.004G073300 Gossypium raimondii Gorai.004G073300 I 0.717
Gorai.007G144400 Gossypium raimondii Gorai.007G144400 I 0.717
Lus10024877.g Linum usitatissimum Lus10024877.g I 0.717
orange1.1g040761m.g Citrus sinensis orange1.1g040761m.g I 0.717
SapurV1A.0006s0980 Salix purpurea SapurV1A.0006s0980 I 0.717
Thhalv10017158m.g Eutrema salsugineum Thhalv10017158m.g I 0.717
LBD29 Arabidopsis thaliana AT3G58190 I 0.707
Bo8g092560 Brassica oleracea Bo8g092560 I 0.707
Bra016877 Brassica rapa Bra016877 I 0.707
BRADI3G12550 Brachypodium distachyon BRADI3G12550 I 0.707
GLYMA10G04050 Glycine max GLYMA10G04050 I 0.707
GLYMA13G18210 Glycine max GLYMA13G18210 I 0.707
GLYMA19G34590 Glycine max GLYMA19G34590 I 0.707
GSMUA_Achr11G02110_001 Musa acuminata GSMUA_Achr11G02110_001 I 0.707
GSMUA_Achr8G14330_001 Musa acuminata GSMUA_Achr8G14330_001 I 0.707
LPERR08G20530 Leersia perrieri LPERR08G20530 I 0.707
POPTR_0002s04210 Populus trichocarpa POPTR_0002s04210 I 0.707
POPTR_0005s24320 Populus trichocarpa POPTR_0005s24320 I 0.707
PRUPE_ppa025349mg Prunus persica PRUPE_ppa025349mg I 0.707
Si015156m.g Setaria italica Si015156m.g I 0.707
TCM_004106 Theobroma cacao TCM_004106 I 0.707
Traes_4BS_5D9291539 Triticum aestivum Traes_4BS_5D9291539 I 0.707
28428.m000040 Ricinus communis 28428.m000040 I 0.707
29883.m002035 Ricinus communis 29883.m002035 I 0.707
Aquca_034_00401 Aquilegia coerulea Aquca_034_00401 I 0.707
Eucgr.K03284 Eucalyptus grandis Eucgr.K03284 I 0.707
evm.TU.supercontig_50.42 Carica papaya evm.TU.supercontig_50.42 I 0.707
Gorai.004G073400 Gossypium raimondii Gorai.004G073400 I 0.707
Gorai.007G144500 Gossypium raimondii Gorai.007G144500 I 0.707
Lus10000613.g Linum usitatissimum Lus10000613.g I 0.707
Lus10000707.g Linum usitatissimum Lus10000707.g I 0.707
MDP0000145761 Malus domestica MDP0000145761 I 0.707
Pavir.Fa00011 Panicum virgatum Pavir.Fa00011 I 0.707
SapurV1A.0006s0970 Salix purpurea SapurV1A.0006s0970 I 0.707
SapurV1A.0378s0180 Salix purpurea SapurV1A.0378s0180 I 0.707
Thhalv10006226m.g Eutrema salsugineum Thhalv10006226m.g I 0.707
PDK_20s1428661g002 Phoenix dactylifera PDK_20s1428661g002 I 0.707
gw1.190.59.1 Physcomitrella patens gw1.190.59.1 I 0.705
OBART02G37570 Oryza barthii OBART02G37570 I 0.701
PK23380.1 Cannabis sativa PK23380.1 I 0.701