CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OLONG_020840
(
Oryza longistaminata
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
OLONG_020840
T245607_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_020840-R1
LOB
13
112
PCGACKFLRRKCAAECVFAPYFCAEDGAAQFAAIHKVFGASNAAKLLQQVAPGDRSEVAATVTYEAQARLRDPVYGCVAHIFALQQQVQVAQAKTQVAQT
Links
Other
LOB
family TFs
Other
Oryza longistaminata
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OMERI07G01670
Oryza meridionalis
OMERI07G01670
N
1.000
BGIOSGA011866
Oryza indica
BGIOSGA011866
I
0.899
OPUNC03G03510
Oryza punctata
OPUNC03G03510
I
0.899
ORGLA03G0035800
Oryza glaberrima
ORGLA03G0035800
I
0.899
OS03G0149000
Oryza sativa
OS03G0149000
I
0.899
Traes_4BL_F71DE14F7
Triticum aestivum
Traes_4BL_F71DE14F7
N
0.899
Traes_4BS_B43A99154
Triticum aestivum
Traes_4BS_B43A99154
N
0.899
MLOC_10783
Hordeum vulgare
MLOC_10783
N
0.889
OB03G13880
Oryza brachyantha
OB03G13880
I
0.889
Traes_4AL_3BA1D51E2
Triticum aestivum
Traes_4AL_3BA1D51E2
N
0.889
Traes_4DL_05F87867C
Triticum aestivum
Traes_4DL_05F87867C
N
0.889
OBART03G03820
Oryza barthii
OBART03G03820
I
0.879
OGLUM03G03700
Oryza glumaepatula
OGLUM03G03700
I
0.879
ONIVA03G03570
Oryza nivara
ONIVA03G03570
I
0.879
ORUFI03G03540
Oryza rufipogon
ORUFI03G03540
I
0.879
LPERR03G03460
Leersia perrieri
LPERR03G03460
I
0.869
GRMZM2G092483
Zea mays
GRMZM2G092483
I
0.859
Si037727m.g
Setaria italica
Si037727m.g
I
0.859
Pavir.J24246
Panicum virgatum
Pavir.J24246
I
0.859
Sb01g047000
Sorghum bicolor
Sb01g047000
I
0.848
Pavir.Ib00282
Panicum virgatum
Pavir.Ib00282
I
0.848
BRADI1G75120
Brachypodium distachyon
BRADI1G75120
N
0.828
MLOC_61947
Hordeum vulgare
MLOC_61947
I
0.771
BRADI1G75110
Brachypodium distachyon
BRADI1G75110
I
0.727
GRMZM2G092542
Zea mays
GRMZM2G092542
I
0.727
MLOC_10784
Hordeum vulgare
MLOC_10784
I
0.727
Traes_4AL_CAF4E16B5
Triticum aestivum
Traes_4AL_CAF4E16B5
I
0.727
Traes_4BL_A4D0F4AD6
Triticum aestivum
Traes_4BL_A4D0F4AD6
I
0.727
Traes_4DL_43D63ABE3
Triticum aestivum
Traes_4DL_43D63ABE3
I
0.727
LPERR02G31040
Leersia perrieri
LPERR02G31040
I
0.717
Traes_6AL_D6045E37C
Triticum aestivum
Traes_6AL_D6045E37C
I
0.717
Traes_6DL_850266B2A
Triticum aestivum
Traes_6DL_850266B2A
I
0.717
TRIUR3_01477
Triticum urartu
TRIUR3_01477
I
0.717
BGIOSGA005344
Oryza indica
BGIOSGA005344
I
0.707
GRMZM2G075499
Zea mays
GRMZM2G075499
I
0.707
GSMUA_Achr1G01360_001
Musa acuminata
GSMUA_Achr1G01360_001
I
0.707
GSMUA_Achr4G25190_001
Musa acuminata
GSMUA_Achr4G25190_001
I
0.707
GSMUA_AchrUn_randomG23710_001
Musa acuminata
GSMUA_AchrUn_randomG23710_001
I
0.707
MLOC_52276
Hordeum vulgare
MLOC_52276
I
0.707
OB02G44330
Oryza brachyantha
OB02G44330
I
0.707
OGLUM02G38740
Oryza glumaepatula
OGLUM02G38740
I
0.707
OMERI02G35350
Oryza meridionalis
OMERI02G35350
I
0.707
ONIVA02G40360
Oryza nivara
ONIVA02G40360
I
0.707
ORGLA02G0327800
Oryza glaberrima
ORGLA02G0327800
I
0.707
ORUFI02G39110
Oryza rufipogon
ORUFI02G39110
I
0.707
OS02G0820500
Oryza sativa
OS02G0820500
I
0.707
Sb04g037550
Sorghum bicolor
Sb04g037550
I
0.707
Si019578m.g
Setaria italica
Si019578m.g
I
0.707
Pavir.Aa00097
Panicum virgatum
Pavir.Aa00097
I
0.707
Pavir.J39638
Panicum virgatum
Pavir.J39638
I
0.707