PGSC0003DMG400007503 (Solanum tuberosum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 PGSC0003DMG400007503 T245814_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD4
M02261_2.00 		Arabidopsis thaliana
VDNVCGSNNN
NNNSCGBNHB		 PBM
Weirauch et al.(2014)
pTH7515 		0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400019410 LOB 35 133

Links

Other LOB family TFs
Other Solanum tuberosum TFs

207 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G26980 Brachypodium distachyon BRADI1G26980 N
MLOC_2737 Hordeum vulgare MLOC_2737 N
ORGLA07G0123500 Oryza glaberrima ORGLA07G0123500 N
BGIOSGA024272 Oryza indica BGIOSGA024272 N
OLONG_010536 Oryza longistaminata OLONG_010536 N
OS07G0496300 Oryza sativa OS07G0496300 N
Pavir.Ba00914 Panicum virgatum Pavir.Ba00914 N
Pavir.J10702 Panicum virgatum Pavir.J10702 N
Si033400m.g Setaria italica Si033400m.g N
Sb02g033910 Sorghum bicolor Sb02g033910 N
Traes_2AS_1683BEFD0 Triticum aestivum Traes_2AS_1683BEFD0 N
GRMZM2G406651 Zea mays GRMZM2G406651 N