CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400013182
(
Solanum tuberosum
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
PGSC0003DMG400013182
T245823_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400034288
LOB
10
107
ACAACKYQRRRCHDCPLAPYFPADQPKMFQNAHRLFGVSNILKILKQLDPSQKKVAMKSIIYQANARDKHPVYGCVAEIQNLLFNIQLYEEELQAVNA
Links
Other
LOB
family TFs
Other
Solanum tuberosum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Solyc03g113360.2
Solanum lycopersicum
Solyc03g113360.2
N
0.949
GSMUA_Achr5G15570_001
Musa acuminata
GSMUA_Achr5G15570_001
N
0.810
MDP0000216231
Malus domestica
MDP0000216231
N
0.727
PRUPE_ppa025223mg
Prunus persica
PRUPE_ppa025223mg
N
0.724
Pm024623
Prunus mume
Pm024623
N
0.724
evm.TU.supercontig_17.185
Carica papaya
evm.TU.supercontig_17.185
N
0.717
MDP0000153290
Malus domestica
MDP0000153290
N
0.717