Sb01g047000 (Sorghum bicolor)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 Sb01g047000 T245963_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD16
M00870_2.00 		Arabidopsis thaliana
DNHHYVCGG
CCGBRDDNH		 PBM
Franco-Zorrilla et al.(2014)
LBD16 		0.737 0.737
LBD16
M06958_2.00 		Arabidopsis thaliana
SCGGAAAWNVCGSMR
YKSCGBNWTTTCCGS		 Dap-seq
OMalley et al.(2016)
ASL18_col_a 		0.737 0.737
LBD16
M06959_2.00 		Arabidopsis thaliana
SCDBDWTTYVCGSHDN
NHDSCGBRAAWHVHGS		 Dap-seq
OMalley et al.(2016)
ASL18_colamp_a 		0.737 0.737
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Sb01g047000.1 LOB 16 115

Links

Other LOB family TFs
Other Sorghum bicolor TFs

175 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DOTSEDRAFT_71721 Dothistroma septosporum DOTSEDRAFT_71721 N
estExt_fgenesh1_pg.C_70076 Mycosphaerella fijiensis estExt_fgenesh1_pg.C_70076 N
estExt_fgenesh1_pm.C_sca_3_chr4_2_00260 Nectria haematococca estExt_fgenesh1_pm.C_sca_3_chr4_2_00260 N
EV44_g2961 Erysiphe necator EV44_g2961 N
GALMADRAFT_241983 Galerina marginata GALMADRAFT_241983 N
HMPREF1624_07649 Sporothrix schenckii HMPREF1624_07649 N
MGG_00349 Magnaporthe oryzae MGG_00349 N
MYCFIDRAFT_87337 Pseudocercospora fijiensis MYCFIDRAFT_87337 N
NechaG104073 Fusarium solani NechaG104073 N
PaG_02222 Pseudozyma aphidis PaG_02222 N
PDE_09174 Penicillium oxalicum PDE_09174 N
SPBR_07677 Sporothrix brasiliensis SPBR_07677 N
UCRPA7_4034 Togninia minima UCRPA7_4034 N