CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_007211
(
Theobroma cacao
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03195 (DUF260)
IPR004883
TCM_007211
T246122_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOX98450
LOB
51
153
SCNGCRVLRKGCSENCMLRQSLQCIDNPQAQAHATVFVAKFFGRAGLMSFLSSVSKPQRPALFHSLMFEAVGRAVNPVSGAVGLLWTGNWNVCQSAVQTVLRG
Links
Other
LOB
family TFs
Other
Theobroma cacao
TFs
180 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.8705s0016
Boechera stricta
Bostr.8705s0016
N
Bostr.26833s0197
Boechera stricta
Bostr.26833s0197
N
Cagra.2519s0016
Capsella grandiflora
Cagra.2519s0016
N
Carubv10028580m.g
Capsella rubella
Carubv10028580m.g
N
evm.TU.supercontig_347.7
Carica papaya
evm.TU.supercontig_347.7
N
evm.TU.supercontig_347.11
Carica papaya
evm.TU.supercontig_347.11
N
evm.TU.contig_37271
Carica papaya
evm.TU.contig_37271
N
evm.TU.contig_35751
Carica papaya
evm.TU.contig_35751
N
evm.TU.contig_35713
Carica papaya
evm.TU.contig_35713
N
evm.TU.contig_30114.1
Carica papaya
evm.TU.contig_30114.1
N
evm.TU.supercontig_348.8
Carica papaya
evm.TU.supercontig_348.8
N
evm.TU.supercontig_505.2
Carica papaya
evm.TU.supercontig_505.2
N
evm.TU.supercontig_625.4
Carica papaya
evm.TU.supercontig_625.4
N
evm.TU.supercontig_654.4
Carica papaya
evm.TU.supercontig_654.4
N
evm.TU.supercontig_654.6
Carica papaya
evm.TU.supercontig_654.6
N
evm.TU.supercontig_695.1
Carica papaya
evm.TU.supercontig_695.1
N
evm.TU.supercontig_695.7
Carica papaya
evm.TU.supercontig_695.7
N
evm.TU.supercontig_758.2
Carica papaya
evm.TU.supercontig_758.2
N
Thhalv10000479m.g
Eutrema salsugineum
Thhalv10000479m.g
N
Thhalv10003338m.g
Eutrema salsugineum
Thhalv10003338m.g
N
Lus10037450.g
Linum usitatissimum
Lus10037450.g
N
Lus10015726.g
Linum usitatissimum
Lus10015726.g
N
Lus10003940.g
Linum usitatissimum
Lus10003940.g
N
Lus10003481.g
Linum usitatissimum
Lus10003481.g
N
cassava27922.m1
Manihot esculenta
cassava27922.m1
N
cassava44772.m1
Manihot esculenta
cassava44772.m1
N
POPTR_0016s12650
Populus trichocarpa
POPTR_0016s12650
N
POPTR_0009s08750
Populus trichocarpa
POPTR_0009s08750
N
Pm021071
Prunus mume
Pm021071
N
PRUPE_ppa026127mg
Prunus persica
PRUPE_ppa026127mg
N
28348.m000077
Ricinus communis
28348.m000077
N
30099.m001672
Ricinus communis
30099.m001672
N
SapurV1A.0019s0690
Salix purpurea
SapurV1A.0019s0690
N
SapurV1A.0175s0160
Salix purpurea
SapurV1A.0175s0160
N
SapurV1A.0175s0180
Salix purpurea
SapurV1A.0175s0180
N
SapurV1A.0175s0190
Salix purpurea
SapurV1A.0175s0190
N
VIT_03s0088g00600
Vitis vinifera
VIT_03s0088g00600
N
VIT_01s0010g01500
Vitis vinifera
VIT_01s0010g01500
N