LBD3 (Vitis vinifera)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03195 (DUF260) IPR004883 VIT_19s0027g01120 T246277_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LBD4
M02261_2.00 		Arabidopsis thaliana
VDNVCGSNNN
NNNSCGBNHB		 PBM
Weirauch et al.(2014)
pTH7515 		0.909 0.909
gw1.238.28.1
M02262_2.00 		Physcomitrella patens
NNNNNVNGSN
NSCNBNNNNN		 PBM
Weirauch et al.(2014)
pTH8459 		0.828 0.828
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_19s0027g01120.t01 LOB 13 111

Links

Other LOB family TFs
Other Vitis vinifera TFs

425 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G64550 Brachypodium distachyon BRADI1G64550 N
GRMZM2G038015 Zea mays GRMZM2G038015 N
GRMZM2G066734 Zea mays GRMZM2G066734 N
Si039895m.g Setaria italica Si039895m.g N
Pavir.Ia03528 Panicum virgatum Pavir.Ia03528 N
Pavir.Ib01437 Panicum virgatum Pavir.Ib01437 N