Pm015540 (Prunus mume)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Pm015540 T246375_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm015540 LOB 4 72

Links

Other LOB family TFs
Other Prunus mume TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
28152.m000908 Ricinus communis 28152.m000908 I
28637.m000203 Ricinus communis 28637.m000203 I
29661.m000908 Ricinus communis 29661.m000908 I
30147.m014242 Ricinus communis 30147.m014242 I
30170.m013751 Ricinus communis 30170.m013751 I
ZAT1 Arabidopsis thaliana AT1G02030 D
ZAT10 Arabidopsis thaliana AT1G27730 D
ZAT11 Arabidopsis thaliana AT2G37430 I
AZF2 Arabidopsis thaliana AT3G19580 D
AT3G53600 Arabidopsis thaliana AT3G53600 D
ZAT3 Arabidopsis thaliana AT4G35280 I
ZAT6 Arabidopsis thaliana AT5G04340 D
BGIOSGA026045 Oryza indica BGIOSGA026045 N
Bo00576s170 Brassica oleracea Bo00576s170 I
Bo1g081350 Brassica oleracea Bo1g081350 I
Bo1g113530 Brassica oleracea Bo1g113530 I
Bo3g142840 Brassica oleracea Bo3g142840 I
Bo4g030570 Brassica oleracea Bo4g030570 I
Bo4g186920 Brassica oleracea Bo4g186920 I
Bo5g052290 Brassica oleracea Bo5g052290 I
Bo5g113850 Brassica oleracea Bo5g113850 I
Bo6g067580 Brassica oleracea Bo6g067580 I
Bo7g048650 Brassica oleracea Bo7g048650 I
Bo7g065200 Brassica oleracea Bo7g065200 I
Bo7g117320 Brassica oleracea Bo7g117320 I
Bo9g181170 Brassica oleracea Bo9g181170 I
Bostr.11793s0034 Boechera stricta Bostr.11793s0034 I
Bostr.15697s0099 Boechera stricta Bostr.15697s0099 I
Bostr.19424s0704 Boechera stricta Bostr.19424s0704 I
Bostr.2128s0015 Boechera stricta Bostr.2128s0015 I
Bostr.26675s0176 Boechera stricta Bostr.26675s0176 I
Bostr.3148s0159 Boechera stricta Bostr.3148s0159 I
Bostr.5325s0123 Boechera stricta Bostr.5325s0123 I
Bostr.7867s1389 Boechera stricta Bostr.7867s1389 I
Bra003148 Brassica rapa Bra003148 I
Bra005197 Brassica rapa Bra005197 I
Bra009464 Brassica rapa Bra009464 I
Bra010922 Brassica rapa Bra010922 I
Bra012914 Brassica rapa Bra012914 I
Bra017188 Brassica rapa Bra017188 I
Bra017706 Brassica rapa Bra017706 I
Bra018817 Brassica rapa Bra018817 I
Bra022436 Brassica rapa Bra022436 I
Bra029985 Brassica rapa Bra029985 I
Bra030981 Brassica rapa Bra030981 I
Bra032845 Brassica rapa Bra032845 I
Bra033666 Brassica rapa Bra033666 I
Bra038219 Brassica rapa Bra038219 I
Bra039806 Brassica rapa Bra039806 I
BRADI1G14750 Brachypodium distachyon BRADI1G14750 I
BRADI1G22940 Brachypodium distachyon BRADI1G22940 N
BRADI4G03340 Brachypodium distachyon BRADI4G03340 I
BRADI4G03410 Brachypodium distachyon BRADI4G03410 I
Cagra.0612s0086 Capsella grandiflora Cagra.0612s0086 I
Cagra.0666s0001 Capsella grandiflora Cagra.0666s0001 I
Cagra.2350s0072 Capsella grandiflora Cagra.2350s0072 I
Cagra.6943s0031 Capsella grandiflora Cagra.6943s0031 I
Cagra.9217s0012 Capsella grandiflora Cagra.9217s0012 I
Carubv10001868m.g Capsella rubella Carubv10001868m.g I
Carubv10014391m.g Capsella rubella Carubv10014391m.g I
Carubv10018114m.g Capsella rubella Carubv10018114m.g I
Carubv10024141m.g Capsella rubella Carubv10024141m.g I
cassava12475.valid.m1 Manihot esculenta cassava12475.valid.m1 I
cassava21316.m1 Manihot esculenta cassava21316.m1 I
cassava32957.m1 Manihot esculenta cassava32957.m1 I
cassava35212.m1 Manihot esculenta cassava35212.m1 I
cassava35732.valid.m1 Manihot esculenta cassava35732.valid.m1 I
cassava43667.valid.m1 Manihot esculenta cassava43667.valid.m1 I
Ca_01586 Cicer arietinum Ca_01586 I
Ca_05641 Cicer arietinum Ca_05641 I
Ca_18364 Cicer arietinum Ca_18364 I
chr1.CM0050.50.nc Lotus japonicus chr1.CM0050.50.nc I
chr1.LjT45O14.140.nd Lotus japonicus chr1.LjT45O14.140.nd I
chr5.CM0096.480.nc Lotus japonicus chr5.CM0096.480.nc I
chr5.CM0200.550.nc Lotus japonicus chr5.CM0200.550.nc I
Ciclev10002297m.g Citrus clementina Ciclev10002297m.g I
Ciclev10007101m.g Citrus clementina Ciclev10007101m.g I
Ciclev10029065m.g Citrus clementina Ciclev10029065m.g I
Cla001400 Citrullus lanatus Cla001400 I
Cucsa.219210 Cucumis sativus Cucsa.219210 I
Cucsa.352740 Cucumis sativus Cucsa.352740 I
Eucgr.F02262 Eucalyptus grandis Eucgr.F02262 I
Eucgr.G01247 Eucalyptus grandis Eucgr.G01247 I
evm.TU.supercontig_249.7 Carica papaya evm.TU.supercontig_249.7 I
STZ Arabidopsis lyrata fgenesh2_kg.1__2932__AT1G27730.1 I
AZF2 Arabidopsis lyrata fgenesh2_kg.3__2173__AT3G19580.2 I
fgenesh2_kg.5__1736__AT3G53600.1 Arabidopsis lyrata fgenesh2_kg.5__1736__AT3G53600.1 I
gene02558-v1.0-hybrid Fragaria vesca gene02558-v1.0-hybrid I
GLYMA04G04760 Glycine max GLYMA04G04760 I
GLYMA06G04840 Glycine max GLYMA06G04840 I
GLYMA10G40400 Glycine max GLYMA10G40400 I
GLYMA14G09760 Glycine max GLYMA14G09760 I
GLYMA17G35430 Glycine max GLYMA17G35430 I
Gorai.002G132600 Gossypium raimondii Gorai.002G132600 I
Gorai.005G232300 Gossypium raimondii Gorai.005G232300 I
Gorai.008G020700 Gossypium raimondii Gorai.008G020700 I
Gorai.010G025200 Gossypium raimondii Gorai.010G025200 I
Gorai.013G050100 Gossypium raimondii Gorai.013G050100 I
GRMZM2G089557 Zea mays GRMZM2G089557 N
GRMZM2G170520 Zea mays GRMZM2G170520 I
GSMUA_Achr2G13410_001 Musa acuminata GSMUA_Achr2G13410_001 I
GSMUA_Achr5G08730_001 Musa acuminata GSMUA_Achr5G08730_001 I
Lus10038929.g Linum usitatissimum Lus10038929.g N
MDP0000198015 Malus domestica MDP0000198015 I
MDP0000237150 Malus domestica MDP0000237150 I
MDP0000319225 Malus domestica MDP0000319225 I
MDP0000573176 Malus domestica MDP0000573176 I
MDP0000762756 Malus domestica MDP0000762756 I
mgf006006m Mimulus guttatus mgf006006m I
MLOC_51405 Hordeum vulgare MLOC_51405 I
MLOC_54674 Hordeum vulgare MLOC_54674 I
MTR_1g018420 Medicago truncatula MTR_1g018420 I
MTR_1g106730 Medicago truncatula MTR_1g106730 I
MTR_3g102980 Medicago truncatula MTR_3g102980 I
ONIVA07G18980 Oryza nivara ONIVA07G18980 N
OPUNC12G15600 Oryza punctata OPUNC12G15600 I
orange1.1g024499m.g Citrus sinensis orange1.1g024499m.g I
orange1.1g038669m.g Citrus sinensis orange1.1g038669m.g I
ORUFI07G21440 Oryza rufipogon ORUFI07G21440 N
OS07G0588600 Oryza sativa OS07G0588600 N
OS12G0583700 Oryza sativa OS12G0583700 I
Pavir.J15304 Panicum virgatum Pavir.J15304 N
Pavir.J16973 Panicum virgatum Pavir.J16973 N
PGSC0003DMG400002383 Solanum tuberosum PGSC0003DMG400002383 I
PGSC0003DMG400011548 Solanum tuberosum PGSC0003DMG400011548 I
PGSC0003DMG400015531 Solanum tuberosum PGSC0003DMG400015531 I
PGSC0003DMG400015532 Solanum tuberosum PGSC0003DMG400015532 I
PGSC0003DMG400015533 Solanum tuberosum PGSC0003DMG400015533 I
PGSC0003DMG400015534 Solanum tuberosum PGSC0003DMG400015534 I
PGSC0003DMG400015557 Solanum tuberosum PGSC0003DMG400015557 I
PGSC0003DMG400024550 Solanum tuberosum PGSC0003DMG400024550 I
PGSC0003DMG400034322 Solanum tuberosum PGSC0003DMG400034322 I
PGSC0003DMG400041467 Solanum tuberosum PGSC0003DMG400041467 I
PK10188.1 Cannabis sativa PK10188.1 I
Pm005390 Prunus mume Pm005390 I
Pm021284 Prunus mume Pm021284 I
POPTR_0001s00800 Populus trichocarpa POPTR_0001s00800 I
POPTR_0002s12010 Populus trichocarpa POPTR_0002s12010 I
POPTR_0009s09250 Populus trichocarpa POPTR_0009s09250 I
POPTR_0014s01760 Populus trichocarpa POPTR_0014s01760 I
PRUPE_ppa009924mg Prunus persica PRUPE_ppa009924mg I
PRUPE_ppa011060mg Prunus persica PRUPE_ppa011060mg I
SapurV1A.0005s0440 Salix purpurea SapurV1A.0005s0440 I
SapurV1A.0019s0280 Salix purpurea SapurV1A.0019s0280 I
SapurV1A.0845s0100 Salix purpurea SapurV1A.0845s0100 I
SapurV1A.1544s0070 Salix purpurea SapurV1A.1544s0070 I
SapurV1A.1944s0060 Salix purpurea SapurV1A.1944s0060 I
Sb02g038000 Sorghum bicolor Sb02g038000 N
C2H2 Arabidopsis lyrata scaffold_600374.1 I
scaffold_700593.1 Arabidopsis lyrata scaffold_700593.1 I
Si010615m.g Setaria italica Si010615m.g I
Si023013m.g Setaria italica Si023013m.g I
Solyc01g107170.2 Solanum lycopersicum Solyc01g107170.2 I
Solyc03g115450.1 Solanum lycopersicum Solyc03g115450.1 I
Solyc12g088390.1 Solanum lycopersicum Solyc12g088390.1 I
TCM_000780 Theobroma cacao TCM_000780 I
TCM_007214 Theobroma cacao TCM_007214 I
TCM_034720 Theobroma cacao TCM_034720 I
Thhalv10009894m.g Eutrema salsugineum Thhalv10009894m.g I
Thhalv10010909m.g Eutrema salsugineum Thhalv10010909m.g I
Thhalv10010956m.g Eutrema salsugineum Thhalv10010956m.g I
Thhalv10014546m.g Eutrema salsugineum Thhalv10014546m.g I
Thhalv10021307m.g Eutrema salsugineum Thhalv10021307m.g I
Thhalv10025912m.g Eutrema salsugineum Thhalv10025912m.g I
Traes_2BS_DD07C2EE6 Triticum aestivum Traes_2BS_DD07C2EE6 N
Traes_4BS_FE945D2FC Triticum aestivum Traes_4BS_FE945D2FC I
VIT_03s0091g00690 Vitis vinifera VIT_03s0091g00690 I
VIT_07s0129g00240 Vitis vinifera VIT_07s0129g00240 I
VIT_18s0001g09230 Vitis vinifera VIT_18s0001g09230 I