CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
estExt_Genewise1.C_1840020
(
Physcomitrella patens
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
estExt_Genewise1.C_1840020
T246544_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1.C_1840020
LOB
11
104
ACAACKYQRRKCSADCPLSPYFPPDQPKRFANVHKLFGVSNILRILKHVDPSKREDTVKSIAYEADTREKDPVHGCLGVITVLQNQVSKLKEEL
Links
Other
LOB
family TFs
Other
Physcomitrella patens
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_gwp_gw1.C_1340024
Physcomitrella patens
estExt_gwp_gw1.C_1340024
N
0.947
gw1.9.180.1
Physcomitrella patens
gw1.9.180.1
N
0.936
gw1.73.66.1
Physcomitrella patens
gw1.73.66.1
N
0.929
gw1.10.155.1
Physcomitrella patens
gw1.10.155.1
N
0.889
gw1.9.179.1
Physcomitrella patens
gw1.9.179.1
N
0.869
gw1.13.203.1
Physcomitrella patens
gw1.13.203.1
N
0.851
gw1.56.82.1
Physcomitrella patens
gw1.56.82.1
N
0.840