CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.E02410
(
Eucalyptus grandis
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Eucgr.E02410
T246843_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.E02410.1
LOB
38
117
PCAACKTLRRRCSESCVLAPYFPPSEPAKFAIAHRVFGASNIVKFLLTLPESQRDDAVTSMIYEASTRIRDPVYGCAGAI
Links
Other
LOB
family TFs
Other
Eucalyptus grandis
TFs
94 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA12G07650
Glycine max
GLYMA12G07650
I
0.863
GLYMA11G15810
Glycine max
GLYMA11G15810
N
0.850
PRUPE_ppa011528mg
Prunus persica
PRUPE_ppa011528mg
I
0.850
cassava11218.m1
Manihot esculenta
cassava11218.m1
I
0.850
cassava819.valid.m1
Manihot esculenta
cassava819.valid.m1
I
0.850
POPTR_0008s04350
Populus trichocarpa
POPTR_0008s04350
I
0.838
Cla000556
Citrullus lanatus
Cla000556
I
0.838
Cucsa.052720
Cucumis sativus
Cucsa.052720
I
0.838
Thhalv10008781m.g
Eutrema salsugineum
Thhalv10008781m.g
N
0.838
POPTR_0010s22470
Populus trichocarpa
POPTR_0010s22470
I
0.825
TCM_043081
Theobroma cacao
TCM_043081
I
0.825
cassava40961.m1
Manihot esculenta
cassava40961.m1
I
0.825
SapurV1A.0023s0430
Salix purpurea
SapurV1A.0023s0430
I
0.825
chr3.CM0246.260.nc
Lotus japonicus
chr3.CM0246.260.nc
N
0.825
Bra035698
Brassica rapa
Bra035698
N
0.812
MTR_4g060950
Medicago truncatula
MTR_4g060950
I
0.812
Carubv10010390m.g
Capsella rubella
Carubv10010390m.g
N
0.812
gene23226-v1.0-hybrid
Fragaria vesca
gene23226-v1.0-hybrid
N
0.812
Gorai.004G012800
Gossypium raimondii
Gorai.004G012800
I
0.812
Gorai.006G120900
Gossypium raimondii
Gorai.006G120900
I
0.812
Lus10011645.g
Linum usitatissimum
Lus10011645.g
I
0.812
Lus10036130.g
Linum usitatissimum
Lus10036130.g
I
0.812
SapurV1A.0038s0110
Salix purpurea
SapurV1A.0038s0110
I
0.812
LBD11
Arabidopsis thaliana
AT2G28500
N
0.800
Bo3g040220
Brassica oleracea
Bo3g040220
N
0.800
Bo5g008590
Brassica oleracea
Bo5g008590
N
0.800
Bra018675
Brassica rapa
Bra018675
N
0.800
GLYMA15G05030
Glycine max
GLYMA15G05030
I
0.800
MTR_1g095850
Medicago truncatula
MTR_1g095850
I
0.800
PRUPE_ppa023989mg
Prunus persica
PRUPE_ppa023989mg
I
0.800
VIT_13s0019g03700
Vitis vinifera
VIT_13s0019g03700
I
0.800
Ca_04287
Cicer arietinum
Ca_04287
I
0.800
Pm018585
Prunus mume
Pm018585
I
0.800
Ciclev10032782m.g
Citrus clementina
Ciclev10032782m.g
N
0.800
Gorai.012G094200
Gossypium raimondii
Gorai.012G094200
N
0.800
Lus10040373.g
Linum usitatissimum
Lus10040373.g
I
0.800
Thhalv10017165m.g
Eutrema salsugineum
Thhalv10017165m.g
N
0.800
Bra031599
Brassica rapa
Bra031599
N
0.787
Solyc05g048740.2
Solanum lycopersicum
Solyc05g048740.2
I
0.787
VIT_06s0004g03330
Vitis vinifera
VIT_06s0004g03330
I
0.787
VIT_06s0004g03350
Vitis vinifera
VIT_06s0004g03350
I
0.787
cassava44959.m1
Manihot esculenta
cassava44959.m1
N
0.787
Cucsa.207400
Cucumis sativus
Cucsa.207400
N
0.787
OB05G11740
Oryza brachyantha
OB05G11740
I
0.775
Sb09g002190
Sorghum bicolor
Sb09g002190
I
0.775
Solyc06g005090.2
Solanum lycopersicum
Solyc06g005090.2
I
0.775
Ca_02507
Cicer arietinum
Ca_02507
N
0.775
Cucsa.166030
Cucumis sativus
Cucsa.166030
N
0.775
MDP0000123013
Malus domestica
MDP0000123013
I
0.775
MDP0000151784
Malus domestica
MDP0000151784
I
0.775
Gorai.012G185900
Gossypium raimondii
Gorai.012G185900
N
0.774
AC214648.3_FG005
Zea mays
AC214648.3_FG005
I
0.762
PGSC0003DMG400025400
Solanum tuberosum
PGSC0003DMG400025400
I
0.762
Solyc04g050010.1
Solanum lycopersicum
Solyc04g050010.1
N
0.762
Cla005133
Citrullus lanatus
Cla005133
N
0.762
mgf015666m
Mimulus guttatus
mgf015666m
N
0.762
MDP0000822986
Malus domestica
MDP0000822986
I
0.762
MDP0000879799
Malus domestica
MDP0000879799
N
0.762
Pavir.Ib01336
Panicum virgatum
Pavir.Ib01336
N
0.762
F775_02335
Aegilops tauschii
F775_02335
N
0.750
OB03G23270
Oryza brachyantha
OB03G23270
N
0.750
VIT_13s0019g03720
Vitis vinifera
VIT_13s0019g03720
N
0.750
VIT_13s0019g03830
Vitis vinifera
VIT_13s0019g03830
N
0.750
PGSC0003DMG400004138
Solanum tuberosum
PGSC0003DMG400004138
N
0.738
VIT_13s0019g03800
Vitis vinifera
VIT_13s0019g03800
N
0.738
VIT_13s0019g03820
Vitis vinifera
VIT_13s0019g03820
N
0.738
VIT_13s0019g03840
Vitis vinifera
VIT_13s0019g03840
N
0.738
Traes_4AS_669BAF6C7
Triticum aestivum
Traes_4AS_669BAF6C7
N
0.725
cassava16668.m1
Manihot esculenta
cassava16668.m1
N
0.723
OBART05G01640
Oryza barthii
OBART05G01640
N
0.712
OPUNC05G01610
Oryza punctata
OPUNC05G01610
N
0.706
GLYMA20G02850
Glycine max
GLYMA20G02850
I
0.700
GSMUA_Achr3G17800_001
Musa acuminata
GSMUA_Achr3G17800_001
N
0.700
PGSC0003DMG400008649
Solanum tuberosum
PGSC0003DMG400008649
I
0.700
PRUPE_ppa012253mg
Prunus persica
PRUPE_ppa012253mg
I
0.700
PRUPE_ppa012322mg
Prunus persica
PRUPE_ppa012322mg
I
0.700
Solyc11g045530.1
Solanum lycopersicum
Solyc11g045530.1
I
0.700
VIT_13s0019g03780
Vitis vinifera
VIT_13s0019g03780
N
0.700
LBD3
Vitis vinifera
VIT_19s0027g01120
I
0.700
Cla013678
Citrullus lanatus
Cla013678
I
0.700
Pm011040
Prunus mume
Pm011040
I
0.700
30169.m006340
Ricinus communis
30169.m006340
I
0.700
cassava27818.m1
Manihot esculenta
cassava27818.m1
I
0.700
Cucsa.118370
Cucumis sativus
Cucsa.118370
I
0.700
mgf026046m
Mimulus guttatus
mgf026046m
I
0.700
Aquca_118_00035
Aquilegia coerulea
Aquca_118_00035
I
0.700
Ciclev10006113m.g
Citrus clementina
Ciclev10006113m.g
I
0.700
gene20083-v1.0-hybrid
Fragaria vesca
gene20083-v1.0-hybrid
I
0.700
Gorai.002G104500
Gossypium raimondii
Gorai.002G104500
I
0.700
MDP0000121203
Malus domestica
MDP0000121203
I
0.700
MDP0000268890
Malus domestica
MDP0000268890
I
0.700
MDP0000284409
Malus domestica
MDP0000284409
I
0.700
orange1.1g044340m.g
Citrus sinensis
orange1.1g044340m.g
I
0.700
PK11564.1
Cannabis sativa
PK11564.1
I
0.700