evm.TU.supercontig_17.185 (Carica papaya)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 evm.TU.supercontig_17.185 T246877_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_17.185 LOB 10 108

Links

Other LOB family TFs
Other Carica papaya TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava19740.m1 Manihot esculenta cassava19740.m1 N 0.808
Ciclev10021399m.g Citrus clementina Ciclev10021399m.g N 0.788
MDP0000216231 Malus domestica MDP0000216231 N 0.778
GSMUA_Achr5G15570_001 Musa acuminata GSMUA_Achr5G15570_001 N 0.762
POPTR_0012s07390 Populus trichocarpa POPTR_0012s07390 N 0.758
PRUPE_ppa025223mg Prunus persica PRUPE_ppa025223mg N 0.747
TCM_030184 Theobroma cacao TCM_030184 N 0.747
Pm024623 Prunus mume Pm024623 N 0.747
Cagra.13768s0012 Capsella grandiflora Cagra.13768s0012 N 0.747
Carubv10018376m.g Capsella rubella Carubv10018376m.g N 0.747
Ciclev10029958m.g Citrus clementina Ciclev10029958m.g N 0.747
MDP0000153290 Malus domestica MDP0000153290 N 0.747
orange1.1g042591m.g Citrus sinensis orange1.1g042591m.g N 0.747
SapurV1A.0138s0160 Salix purpurea SapurV1A.0138s0160 N 0.747
LBD27 Arabidopsis thaliana AT3G47870 N 0.737
SCP Arabidopsis lyrata fgenesh1_pg.C_scaffold_5001275 N 0.737
30147.m014053 Ricinus communis 30147.m014053 N 0.737
Bostr.18473s0162 Boechera stricta Bostr.18473s0162 N 0.727
SapurV1A.0161s0030 Salix purpurea SapurV1A.0161s0030 N 0.727
Solyc03g113360.2 Solanum lycopersicum Solyc03g113360.2 N 0.724
PGSC0003DMG400013182 Solanum tuberosum PGSC0003DMG400013182 N 0.717
Thhalv10011007m.g Eutrema salsugineum Thhalv10011007m.g N 0.717
Bo3g135950 Brassica oleracea Bo3g135950 N 0.707
Bra018102 Brassica rapa Bra018102 N 0.707
POPTR_0015s07780 Populus trichocarpa POPTR_0015s07780 N 0.707
SCP Vitis vinifera VIT_17s0000g05490 N 0.707
cassava35156.m1 Manihot esculenta cassava35156.m1 N 0.707
Aquca_025_00139 Aquilegia coerulea Aquca_025_00139 N 0.707
gene09561-v1.0-hybrid Fragaria vesca gene09561-v1.0-hybrid N 0.707
Gorai.007G034800 Gossypium raimondii Gorai.007G034800 N 0.707