CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.003G070700
(
Gossypium raimondii
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Gorai.003G070700
T246946_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.003G070700.1
LOB
10
108
ACAACKYQRRKCIPECLLAPYFPADQTKVFQNAHKLFGVSNIVKILRSLDPSQHAEAMRSIKYQANVRDRFPVYGCLGVIRQLYYQIQMLEEEMHTVLT
Links
Other
LOB
family TFs
Other
Gossypium raimondii
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.007G034800
Gossypium raimondii
Gorai.007G034800
N
0.939
TCM_030184
Theobroma cacao
TCM_030184
N
0.798
MDP0000216231
Malus domestica
MDP0000216231
N
0.727
PRUPE_ppa025223mg
Prunus persica
PRUPE_ppa025223mg
N
0.717
Pm024623
Prunus mume
Pm024623
N
0.717
Ciclev10021399m.g
Citrus clementina
Ciclev10021399m.g
N
0.717
MDP0000153290
Malus domestica
MDP0000153290
N
0.717
cassava19740.m1
Manihot esculenta
cassava19740.m1
N
0.707