Pavir.Fb01201 (Panicum virgatum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Pavir.Fb01201 T247203_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Fb01201.1.p LOB 84 182

Links

Other LOB family TFs
Other Panicum virgatum TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sb07g019940 Sorghum bicolor Sb07g019940 N 0.960
Si015783m.g Setaria italica Si015783m.g N 0.949
AC217910.3_FG006 Zea mays AC217910.3_FG006 N 0.929
BGIOSGA028630 Oryza indica BGIOSGA028630 N 0.838
OBART08G13930 Oryza barthii OBART08G13930 N 0.838
OGLUM08G14700 Oryza glumaepatula OGLUM08G14700 N 0.838
ONIVA08G14880 Oryza nivara ONIVA08G14880 N 0.838
OPUNC08G12580 Oryza punctata OPUNC08G12580 N 0.838
ORGLA08G0122300 Oryza glaberrima ORGLA08G0122300 N 0.838
ORUFI08G15760 Oryza rufipogon ORUFI08G15760 N 0.838
OS08G0402100 Oryza sativa OS08G0402100 N 0.838
LPERR08G11550 Leersia perrieri LPERR08G11550 N 0.828
BRADI3G35280 Brachypodium distachyon BRADI3G35280 N 0.818
GRMZM2G095982 Zea mays GRMZM2G095982 N 0.818
OLONG_012230 Oryza longistaminata OLONG_012230 N 0.805
OB08G21740 Oryza brachyantha OB08G21740 N 0.793
MLOC_81908 Hordeum vulgare MLOC_81908 N 0.788
TRAES3BF113300120CFD_g Triticum aestivum TRAES3BF113300120CFD_g N 0.788
TRIUR3_30753 Triticum urartu TRIUR3_30753 N 0.778
GRMZM2G079768 Zea mays GRMZM2G079768 N 0.768
Pavir.J09527 Panicum virgatum Pavir.J09527 N 0.707