CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Fb01201
(
Panicum virgatum
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Pavir.Fb01201
T247203_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Fb01201.1.p
LOB
84
182
ACAACKYQRRKCNPDCPLAPYFPADQQRRFLNAHRLFGVSNILKTLKRLRPELCADAMGTLIYQSDMRAQDPVGGCYRLILTLERQLELETAELTAVLH
Links
Other
LOB
family TFs
Other
Panicum virgatum
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw1.2.2102.1
Cryphonectria parasitica
e_gw1.2.2102.1
N
e_gw1.93.3.1
Nectria haematococca
e_gw1.93.3.1
N
NechaG55916
Fusarium solani
NechaG55916
N
PODANS_6_5230
Podospora anserina
PODANS_6_5230
N
SMAC_08865
Sordaria macrospora
SMAC_08865
N
X797_000071
Metarhizium robertsii
X797_000071
N