Pavir.J09527 (Panicum virgatum)
LOB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03195 (DUF260) IPR004883 Pavir.J09527 T247229_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J09527.1.p LOB 64 162

Links

Other LOB family TFs
Other Panicum virgatum TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.J19395 Panicum virgatum Pavir.J19395 N 1.000
Pavir.Ba02946 Panicum virgatum Pavir.Ba02946 N 0.990
Si030262m.g Setaria italica Si030262m.g N 0.828
BGIOSGA028630 Oryza indica BGIOSGA028630 N 0.717
BRADI3G35280 Brachypodium distachyon BRADI3G35280 N 0.717
OBART08G13930 Oryza barthii OBART08G13930 N 0.717
OGLUM08G14700 Oryza glumaepatula OGLUM08G14700 N 0.717
ONIVA08G14880 Oryza nivara ONIVA08G14880 N 0.717
OPUNC08G12580 Oryza punctata OPUNC08G12580 N 0.717
ORGLA08G0122300 Oryza glaberrima ORGLA08G0122300 N 0.717
ORUFI08G15760 Oryza rufipogon ORUFI08G15760 N 0.717
OS08G0402100 Oryza sativa OS08G0402100 N 0.717
GSMUA_Achr5G15570_001 Musa acuminata GSMUA_Achr5G15570_001 N 0.714
Sb07g019940 Sorghum bicolor Sb07g019940 N 0.707
Pavir.Fb01201 Panicum virgatum Pavir.Fb01201 N 0.707