CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Thhalv10019764m.g
(
Eutrema salsugineum
)
LOB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03195 (DUF260)
IPR004883
Thhalv10019764m.g
T247356_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Thhalv10019764m
LOB
16
114
ACAACKFQRKKCTKNCLLAPYFPQDRYKQFLNAHRLFGISNITKMLKGIQESERDIAMQNLILHANARALDPVGGVYKIMSDLRRRISYYETELNSIRQ
Links
Other
LOB
family TFs
Other
Eutrema salsugineum
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.24145s0001
Boechera stricta
Bostr.24145s0001
N
0.768
Cagra.1013s0013
Capsella grandiflora
Cagra.1013s0013
N
0.737
Carubv10021744m.g
Capsella rubella
Carubv10021744m.g
N
0.737
LBD7
Arabidopsis thaliana
AT1G72980
N
0.717