CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_23.117
(
Carica papaya
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
evm.TU.supercontig_23.117
T250674_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_23.117
MADF
121
197
EVWSDRFLQLGRRSLRSEDWIDVADKVSEELRIDKKKAQCRQLVDKLKRKYKKEKVKVEKQGLNSSKWVFFRKMDML
Links
Other
MADF
family TFs
Other
Carica papaya
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10008866m.g
Citrus clementina
Ciclev10008866m.g
N
0.870
orange1.1g019823m.g
Citrus sinensis
orange1.1g019823m.g
N
0.870
Thhalv10002883m.g
Eutrema salsugineum
Thhalv10002883m.g
N
0.861
AT3G24490
Arabidopsis thaliana
AT3G24490
N
0.844
scaffold_302996.1
Arabidopsis lyrata
scaffold_302996.1
N
0.844
Bostr.19424s0179
Boechera stricta
Bostr.19424s0179
N
0.841
Bra001951
Brassica rapa
Bra001951
N
0.829
Bo3g083280
Brassica oleracea
Bo3g083280
N
0.828