SapurV1A.0047s0660 (Salix purpurea)
MADF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF10545 (MADF_DNA_bdg) IPR006578 SapurV1A.0047s0660 T250838_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
AT-GTL1
M06968_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_col_a
0.898 0.794
AT-GTL1
M06969_2.00
Arabidopsis thaliana
RHRGTAAAWW

WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_colamp_a
0.898 0.794
For this family, TFs with SR scores > 0.812 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0047s0660.1.p MADF 117 188
SapurV1A.0047s0660.1.p MADF 537 606
SapurV1A.0047s0660.2.p MADF 117 188
SapurV1A.0047s0660.2.p MADF 537 606
SapurV1A.0047s0660.3.p MADF 1 46
SapurV1A.0047s0660.3.p Myb 378 435
SapurV1A.0047s0660.4.p MADF 1 46
SapurV1A.0047s0660.4.p Myb 378 435

Links

Other MADF family TFs
Other Salix purpurea TFs

Invalid Input OrderBy

192 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action