CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SapurV1A.0047s0660
(
Salix purpurea
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
SapurV1A.0047s0660
T250838_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT-GTL1
M06968_2.00
Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_col_a
0.898
0.794
AT-GTL1
M06969_2.00
Arabidopsis thaliana
RHRGTAAAWW
WWTTTACYDY
Dap-seq
OMalley et al.(2016)
GTL1_colamp_a
0.898
0.794
For this family, TFs with SR scores >
0.812
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0047s0660.1.p
MADF
117
188
SEMDATFRDATLKGPLWEDVSRKLAEMGFKRNAKKCKEKFENVHKYYKRTKEGRAGRQDGKRYRFFSQLEAL
SapurV1A.0047s0660.1.p
MADF
537
606
ETRYQEAGPKGPLWEEISAGMQRMGYRRSAKRCKEKWENINKYFKKVKESHKNRPEDAKTCPYFHELDAL
SapurV1A.0047s0660.2.p
MADF
117
188
SEMDATFRDATLKGPLWEDVSRKLAEMGFKRNAKKCKEKFENVHKYYKRTKEGRAGRQDGKRYRFFSQLEAL
SapurV1A.0047s0660.2.p
MADF
537
606
ETRYQEAGPKGPLWEEISAGMQRMGYRRSAKRCKEKWENINKYFKKVKESHKNRPEDAKTCPYFHELDAL
SapurV1A.0047s0660.3.p
MADF
1
46
MGFKRNAKKCKEKFENVHKYYKRTKEGRAGRQDGKRYRFFSQLEAL
SapurV1A.0047s0660.3.p
Myb
378
435
RWPKPEVLALIKLRSGLETRYQEAGPKGPLWEEISAGMQRMGYRRSAKRCKEKWENIN
SapurV1A.0047s0660.4.p
MADF
1
46
MGFKRNAKKCKEKFENVHKYYKRTKEGRAGRQDGKRYRFFSQLEAL
SapurV1A.0047s0660.4.p
Myb
378
435
RWPKPEVLALIKLRSGLETRYQEAGPKGPLWEEISAGMQRMGYRRSAKRCKEKWENIN
Links
Other
MADF
family TFs
Other
Salix purpurea
TFs
192 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy