CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPLIN_001451600
(
Globodera pallida
)
MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF10545 (MADF_DNA_bdg)
IPR006578
GPLIN_001451600
T251980_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPLIN_001451600
MADF
19
105
LIDAVRQRAVIWDCSLDAYQEVQNRRAAFVDVAELLSDEKSKYTGPEMQVEWKKLRDIFNRTLKKVVASGGSDSEVTWRYWTKLQFI
Links
Other
MADF
family TFs
Other
Globodera pallida
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Minc15495
Meloidogyne incognita
Minc15495
N
0.955
genemark-nMf.1.1.scaf00454-processed-gene-0.8
Meloidogyne floridensis
genemark-nMf.1.1.scaf00454-processed-gene-0.8
N
0.955
MhA1_Contig1000.frz3.gene8
Meloidogyne hapla
MhA1_Contig1000.frz3.gene8
N
0.955
BXY_0789100
Bursaphelenchus xylophilus
BXY_0789100
N
0.821
GPLIN_000816000
Globodera pallida
GPLIN_000816000
N
0.532