CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AGL58
(
Arabidopsis thaliana
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
AT1G28450
T252840_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G28450.1
MADS box
16
63
KIEKDEDRSVTLSKRLNAIYTMIIELSILCGVEVAFIGYSCSGKPYTF
Links
Other
MADS box
family TFs
Other
Arabidopsis thaliana
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGL85
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1002660
N
0.833
AGL59
Arabidopsis thaliana
AT1G28460
N
0.896
AGL64
Arabidopsis thaliana
AT1G29962
N
0.833
AGL85
Arabidopsis thaliana
AT1G54760
N
0.846
Bostr.15697s0292
Boechera stricta
Bostr.15697s0292
N
0.771
Cagra.18025s0001
Capsella grandiflora
Cagra.18025s0001
N
0.708
Cagra.5647s0017
Capsella grandiflora
Cagra.5647s0017
N
0.708
Carubv10011216m.g
Capsella rubella
Carubv10011216m.g
N
0.729