CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AGL85
(
Arabidopsis thaliana
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
AT1G54760
T252850_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G54760.1
MADS box
18
43
SNELSILCGAEVAFLGYSCSGKPYTF
Links
Other
MADS box
family TFs
Other
Arabidopsis thaliana
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGL64
Arabidopsis thaliana
AT1G29962
N
0.923
AGL85
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1002660
N
0.923
AGL58
Arabidopsis thaliana
AT1G28450
N
0.846
AGL59
Arabidopsis thaliana
AT1G28460
N
0.846
Bostr.15697s0292
Boechera stricta
Bostr.15697s0292
N
0.846
Cagra.5647s0017
Capsella grandiflora
Cagra.5647s0017
N
0.808
Bra032347
Brassica rapa
Bra032347
N
0.731