CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA003304
(
Oryza indica
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
BGIOSGA003304
T252970_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA003304-PA
MADS box
10
58
RIANDATRRATFKKRRRGLLKKASELATLCDVDACLVVYGEGDAEPEVW
Links
Other
MADS box
family TFs
Other
Oryza indica
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_AchrUn_randomG17230_001
Musa acuminata
GSMUA_AchrUn_randomG17230_001
N
0.729
OBART01G12050
Oryza barthii
OBART01G12050
N
0.958
OBART03G24330
Oryza barthii
OBART03G24330
N
0.702
OB01G21750
Oryza brachyantha
OB01G21750
N
0.894
OB03G33030
Oryza brachyantha
OB03G33030
N
0.750
ORGLA01G0101700
Oryza glaberrima
ORGLA01G0101700
N
0.958
ORGLA03G0226500
Oryza glaberrima
ORGLA03G0226500
N
0.702
OGLUM01G13490
Oryza glumaepatula
OGLUM01G13490
N
0.958
OGLUM03G25150
Oryza glumaepatula
OGLUM03G25150
N
0.702
OMERI03G22160
Oryza meridionalis
OMERI03G22160
N
0.702
ONIVA01G14280
Oryza nivara
ONIVA01G14280
N
1.000
ONIVA03G25700
Oryza nivara
ONIVA03G25700
N
0.702
OPUNC01G11730
Oryza punctata
OPUNC01G11730
N
0.979
ORUFI01G13020
Oryza rufipogon
ORUFI01G13020
N
1.000
Pavir.J14267
Panicum virgatum
Pavir.J14267
N
0.750
Pavir.Ib03850
Panicum virgatum
Pavir.Ib03850
N
0.771
Pavir.Aa01999
Panicum virgatum
Pavir.Aa01999
N
0.717
GRMZM5G853066
Zea mays
GRMZM5G853066
N
0.833
GRMZM5G839969
Zea mays
GRMZM5G839969
N
0.750