CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA036334
(
Oryza indica
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
BGIOSGA036334
T253030_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA036334-PA
MADS box
25
72
HIDNKERWQVTFTKRWGGLFKKASELALLAGASIAVVIFSETNLAYAF
Links
Other
MADS box
family TFs
Other
Oryza indica
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA006672
Oryza indica
BGIOSGA006672
N
0.771
BGIOSGA018453
Oryza indica
BGIOSGA018453
N
0.771
OBART12G09450
Oryza barthii
OBART12G09450
N
0.771
OBART12G09480
Oryza barthii
OBART12G09480
N
0.938
OGLUM12G10670
Oryza glumaepatula
OGLUM12G10670
N
0.938
OGLUM12G10680
Oryza glumaepatula
OGLUM12G10680
N
0.771
OLONG_012662
Oryza longistaminata
OLONG_012662
N
1.000
OLONG_012664
Oryza longistaminata
OLONG_012664
N
0.729
ONIVA12G01580
Oryza nivara
ONIVA12G01580
N
0.771
ONIVA12G01620
Oryza nivara
ONIVA12G01620
N
0.938
OPUNC12G08600
Oryza punctata
OPUNC12G08600
N
0.812
OPUNC12G08610
Oryza punctata
OPUNC12G08610
N
0.708
ORGLA12G0089600
Oryza glaberrima
ORGLA12G0089600
N
0.771
ORGLA12G0089800
Oryza glaberrima
ORGLA12G0089800
N
0.938
ORUFI12G10490
Oryza rufipogon
ORUFI12G10490
N
0.771
ORUFI12G10530
Oryza rufipogon
ORUFI12G10530
N
0.938
OS12G0407000
Oryza sativa
OS12G0407000
N
0.771