CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra024521
(
Brassica rapa
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Bra024521
T253317_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra024521.1-P
MADS box
10
54
LISDNATRRVTFRKRKHGLLKKLNELTILCGLRACAIIYSDYEEG
Links
Other
MADS box
family TFs
Other
Brassica rapa
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG006549.1
Alligator sinensis
Alligator_sinensis_CCG006549.1
N
Alligator_sinensis_CCG012137.1
Alligator sinensis
Alligator_sinensis_CCG012137.1
N
Cmyd_10020515
Chelonia mydas
Cmyd_10020515
N
ENSACAG00000008910
Anolis carolinensis
ENSACAG00000008910
N
ENSAMEG00000012129
Ailuropoda melanoleuca
ENSAMEG00000012129
N
GLIS3
Choloepus hoffmanni
ENSCHOG00000011466
N
GLIS1
Callithrix jacchus
ENSCJAG00000004690
I
ENSDNOG00000012636
Dasypus novemcinctus
ENSDNOG00000012636
N
ENSFCAG00000002365
Felis catus
ENSFCAG00000002365
N
ENSLAFG00000031654
Loxodonta africana
ENSLAFG00000031654
N
ENSMLUG00000030513
Myotis lucifugus
ENSMLUG00000030513
N
ENSOCUG00000004030
Oryctolagus cuniculus
ENSOCUG00000004030
N
GLIS3
Sus scrofa
ENSSSCG00000005224
N
GLIS3
Tursiops truncatus
ENSTTRG00000004021
N
lmd
Drosophila melanogaster
FBgn0039039
D
Ogr15137
Ophisaurus gracilis
Ogr15137
N