CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra024521
(
Brassica rapa
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Bra024521
T253317_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra024521.1-P
MADS box
10
54
LISDNATRRVTFRKRKHGLLKKLNELTILCGLRACAIIYSDYEEG
Links
Other
MADS box
family TFs
Other
Brassica rapa
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGL87
Arabidopsis thaliana
AT1G22590
N
0.778
Bo5g038690
Brassica oleracea
Bo5g038690
N
0.978
Bo7g057820
Brassica oleracea
Bo7g057820
N
0.837
Bostr.12659s0111
Boechera stricta
Bostr.12659s0111
N
0.844
Bra012335
Brassica rapa
Bra012335
N
0.867
Cagra.0114s0045
Capsella grandiflora
Cagra.0114s0045
N
0.791
Cagra.2356s0007
Capsella grandiflora
Cagra.2356s0007
N
0.756
Carubv10006189m.g
Capsella rubella
Carubv10006189m.g
N
0.756
Carubv10011303m.g
Capsella rubella
Carubv10011303m.g
N
0.791
Carubv10021360m.g
Capsella rubella
Carubv10021360m.g
N
0.791
Carubv10021540m.g
Capsella rubella
Carubv10021540m.g
N
0.733
Carubv10021762m.g
Capsella rubella
Carubv10021762m.g
N
0.837
Carubv10022252m.g
Capsella rubella
Carubv10022252m.g
N
0.778
Thhalv10008961m.g
Eutrema salsugineum
Thhalv10008961m.g
N
0.889