CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra032347
(
Brassica rapa
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
Bra032347
T253355_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra032347.1-P
MADS box
16
63
KVTKNEDRIITFSKRKNGIYTKLSELSILCGADVGFLIYSGSGKPFTF
Links
Other
MADS box
family TFs
Other
Brassica rapa
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo5g061120
Brassica oleracea
Bo5g061120
N
0.958
Bostr.15697s0292
Boechera stricta
Bostr.15697s0292
N
0.771
AGL64
Arabidopsis thaliana
AT1G29962
N
0.750
AGL85
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1002660
N
0.750
AGL85
Arabidopsis thaliana
AT1G54760
N
0.731
Thhalv10009431m.g
Eutrema salsugineum
Thhalv10009431m.g
N
0.729
Cagra.5647s0017
Capsella grandiflora
Cagra.5647s0017
N
0.708
Carubv10021362m.g
Capsella rubella
Carubv10021362m.g
N
0.706