CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MEF2C
(
Canis familiaris
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
ENSCAFG00000008302
T253590_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MEF2C
M02745_2.00
Homo sapiens
TWCTAWAAATAG
CTATTTWTAGWA
SELEX
Jolma et al.(2010)
MEF2C_dimer
1.000
1.000
MEF2C
M05551_2.00
Homo sapiens
CYWWATWWGG
CCWWATWWRG
SELEX
Yin et al.(2017)
MEF2C_FL_HT-SELEX
1.000
1.000
MEF2C
M08149_2.00
Homo sapiens
NDDMYAAAAATAGMH
DKCTATTTTTRKHHN
ChIP-seq
Mathelier et al.(2014)
MA0497.1
1.000
1.000
MEF2C
M07980_2.00
Homo sapiens
NDDYYAAAAATAGHH
DDCTATTTTTRRHHN
ChIP-seq
Gerstein et al.(2012)
GM12878_MEF2C_HudsonAlpha
1.000
1.000
MEF2C
M09248_2.00
Homo sapiens
DYYAAAAATARMH
DKYTATTTTTRRH
Misc
Kulakovskiy et al.(2013)
MEF2C_HUMAN.H11MO.0.A
1.000
1.000
Mef2c
M09253_2.00
Mus musculus
DDMYAAAAATAGMHN
NDKCTATTTTTRKHH
Misc
Kulakovskiy et al.(2013)
MEF2C_MOUSE.H11MO.0.A
1.000
1.000
MEF2C
M09597_2.00
Homo sapiens
DHYWDAAATARM
KYTATTTHWRDH
Misc
Heinz et al.(2010)
GM12878-Mef2c_GSE32465
1.000
1.000
MEF2C
M10945_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2C_02
1.000
1.000
MEF2C
M10946_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2C_Q4
1.000
1.000
MEF2C
M05552_2.00
Homo sapiens
CYWWATWWGG
CCWWATWWRG
SELEX
Yin et al.(2017)
MEF2C_FL_Methyl-HT-SELEX
1.000
1.000
MEF2A
M03340_2.00
Homo sapiens
KCTAWAAATAGM
KCTATTTWTAGM
SELEX
Jolma et al.(2013)
MEF2A_1
0.979
0.979
MEF2A
M07979_2.00
Homo sapiens
NDDHYAAAAATARHH
DDYTATTTTTRDHHN
ChIP-seq
Gerstein et al.(2012)
GM12878_MEF2A_HudsonAlpha
0.979
0.979
MEF2A
M08212_2.00
Homo sapiens
CTAWWWWTAG
CTAWWWWTAG
ChIP-seq
Contrino et al.(2012)
Mv88
0.975
0.975
MEF2A
M08213_2.00
Homo sapiens
AAAATAGM
KCTATTTT
ChIP-seq
Contrino et al.(2012)
Mv90
0.975
0.975
MEF2A
M09247_2.00
Homo sapiens
DYYAAAAATAGMH
DKCTATTTTTRRH
Misc
Kulakovskiy et al.(2013)
MEF2A_HUMAN.H11MO.0.A
0.975
0.975
Mef2a
M09255_2.00
Mus musculus
DDCYAWAAATARMH
DKYTATTTWTRGHH
Misc
Kulakovskiy et al.(2013)
MEF2A_MOUSE.H11MO.0.A
0.979
0.979
Mef2a
M09599_2.00
Mus musculus
CYNDAAATAG
CTATTTHNRG
Misc
Heinz et al.(2010)
HL1-Mef2a.biotin_GSE21529
0.979
0.979
MEF2A
M10933_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AMEF2_Q6
0.979
0.979
MEF2A
M10934_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HMEF2_Q6
0.979
0.979
MEF2A
M10935_2.00
Homo sapiens
BTCTAAAAATAACYCY
RGRGTTATTTTTAGAV
Transfac
Matys et al.(2006)
V$MEF2_01
0.975
0.975
MEF2A
M10936_2.00
Homo sapiens
BNNNDDDCTAWAAATAGMHNNN
NNNDKCTATTTWTAGHHHNNNV
Transfac
Matys et al.(2006)
V$MEF2_02
0.979
0.979
MEF2A
M10937_2.00
Homo sapiens
NNNNDWKCTAWAAATAGMHHNN
NNDDKCTATTTWTAGMWHNNNN
Transfac
Matys et al.(2006)
V$MEF2_03
0.975
0.975
MEF2A
M10938_2.00
Homo sapiens
NVTGTTRCTAWAAATAGAAHHN
NDDWTCTATTTWTAGYAACABN
Transfac
Matys et al.(2006)
V$MEF2_04
0.975
0.975
MEF2A
M10939_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2A_05
0.975
0.975
MEF2A
M10940_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2A_Q6
0.975
0.975
MEF2A
M10941_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2_Q6_02
0.975
0.975
MEF2A
M10942_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MMEF2_Q6
0.975
0.975
MEF2A
M10943_2.00
Homo sapiens
NDKCTAWAAATAGMHH
DDKCTATTTWTAGMHN
Transfac
Matys et al.(2006)
V$RSRFC4_01
0.975
0.975
MEF2A
M10944_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$RSRFC4_Q2
0.979
0.979
MEF2B
M03344_2.00
Homo sapiens
RCTAWAAATAGM
KCTATTTWTAGY
SELEX
Jolma et al.(2013)
MEF2B_1
0.950
0.950
MEF2D
M03343_2.00
Homo sapiens
DCTAWAAATAGM
KCTATTTWTAGH
SELEX
Jolma et al.(2013)
MEF2D_1
0.938
0.938
MEF2D
M05555_2.00
Homo sapiens
CYWWATWWGG
CCWWATWWRG
SELEX
Yin et al.(2017)
MEF2D_eDBD_HT-SELEX
0.938
0.938
MEF2D
M09250_2.00
Homo sapiens
CTAWAAATAGMH
DKCTATTTWTAG
Misc
Kulakovskiy et al.(2013)
MEF2D_HUMAN.H11MO.0.A
0.938
0.938
MEF2B
M05557_2.00
Homo sapiens
CYNDWWWHGG
CCDWWWHNRG
SELEX
Yin et al.(2017)
MEF2B_eDBD_HT-SELEX
0.950
0.950
MEF2B
M05559_2.00
Homo sapiens
CCVDWTATGGTAACA
TGTTACCATAWHBGG
SELEX
Yin et al.(2017)
MEF2B_FL_HT-SELEX
0.950
0.950
Mef2d
M09252_2.00
Mus musculus
DDCTAWAAATAGMH
DKCTATTTWTAGHH
Misc
Kulakovskiy et al.(2013)
MEF2D_MOUSE.H11MO.0.A
0.938
0.938
MEF2D
M10957_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2D_Q4
0.938
0.938
MEF2B
M09251_2.00
Homo sapiens
CYWAAAATAGHHHH
DDDDCTATTTTWRG
Misc
Kulakovskiy et al.(2013)
MEF2B_HUMAN.H11MO.0.A
0.950
0.950
MEF2D
M05556_2.00
Homo sapiens
CYWWATWWGG
CCWWATWWRG
SELEX
Yin et al.(2017)
MEF2D_eDBD_Methyl-HT-SELEX
0.938
0.938
MEF2B
M05558_2.00
Homo sapiens
CYWWWWWNGG
CCNWWWWWRG
SELEX
Yin et al.(2017)
MEF2B_eDBD_Methyl-HT-SELEX
0.950
0.950
MEF2B
M05560_2.00
Homo sapiens
CCVDATATGGTAACR
YGTTACCATATHBGG
SELEX
Yin et al.(2017)
MEF2B_FL_Methyl-HT-SELEX
0.950
0.950
Mef2b
M10958_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEF2B_02
0.900
0.900
Mef2
M08214_2.00
Drosophila melanogaster
YTAWWWWTAR
YTAWWWWTAR
ChIP-seq
Contrino et al.(2012)
Mf26
0.875
0.875
AGL6
M06986_2.00
Arabidopsis thaliana
TTWCCHAAAAWRGWAANWW
WWNTTWCYWTTTTDGGWAA
Dap-seq
OMalley et al.(2016)
AGL6_col_a
0.700
0.700
SVP
M06984_2.00
Arabidopsis thaliana
DDCCVAAWANGGHAA
TTDCCNTWTTBGGHH
Dap-seq
OMalley et al.(2016)
SVP_colamp_v3b
0.700
0.700
SVP
M06985_2.00
Arabidopsis thaliana
CCMAAWANGGWAANW
WNTTWCCNTWTTKGG
Dap-seq
OMalley et al.(2016)
SVP_col_v3b
0.700
0.700
SVP
M08424_2.00
Arabidopsis thaliana
NWWHCCMAAAADGGAAARHH
DDYTTTCCHTTTTKGGDWWN
ChIP-chip
Mathelier et al.(2014)
MA0555.1
0.700
0.700
Q9ATF1_PETHY
M11013_2.00
Petunia x hybrida
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$FBP9_01
0.700
0.700
MAD17_ORYSJ
M10961_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS17_01
0.700
0.700
Q9ZRA5_MALDO
M11030_2.00
Malus domestica
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS2_04
0.700
0.700
Q9ST54_MALDO
M11029_2.00
Malus domestica
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS3_04
0.700
0.700
Q9LM09_TOBAC
M11016_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS4_01
0.700
0.700
MADS6
M10967_2.00
Oryza sativa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS6_01
0.700
0.700
O82697_MALDO
M11020_2.00
Malus domestica
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$MADS7_01
0.700
0.700
Solyc05g012020.2
M10986_2.00
Solanum lycopersicum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$RIN_01
0.700
0.700
Solyc05g012020.2
M10987_2.00
Solanum lycopersicum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$RIN_Q2_01
0.700
0.700
Solyc05g012020.2
M10988_2.00
Solanum lycopersicum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$RIN_Q2
0.700
0.700
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000012216
MADS box
10
57
RIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQY
ENSCAFP00000012227
MADS box
10
57
RIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQY
ENSCAFP00000036549
MADS box
1
40
QVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQY
Links
Other
MADS box
family TFs
Other
Canis familiaris
TFs
664 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy