CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSOARG00000005757
(
Ovis aries
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
ENSOARG00000005757
T253746_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
srfA
M02283_2.00
Dictyostelium discoideum
MYDWWWNNRD
HYNNWWWHRK
PBM
Weirauch et al.(2014)
pTH5539
0.929
0.929
Srf
M00178_2.00
Mus musculus
NNDDWWHHNN
NNDDWWHHNN
PBM
Badis et al.(2009)
Srf_3509
0.929
0.929
SRF
M03341_2.00
Homo sapiens
DCCWTATATGGT
ACCATATAWGGH
SELEX
Jolma et al.(2013)
SRF_1
0.929
0.929
SRF
M03342_2.00
Homo sapiens
TKHCCWTATATGGKMA
TKMCCATATAWGGDMA
SELEX
Jolma et al.(2013)
SRF_2
0.929
0.929
SRF
M05553_2.00
Homo sapiens
CCNTANAWGG
CCWTNTANGG
SELEX
Yin et al.(2017)
SRF_eDBD_HT-SELEX
0.929
0.929
SRF
M07981_2.00
Homo sapiens
NNNWDNCCAWAWAWGGNVD
HBNCCWTWTWTGGNHWNNN
ChIP-seq
Gerstein et al.(2012)
GM12878_SRF_HudsonAlpha
0.929
0.929
SRF
M07982_2.00
Homo sapiens
CCAWATAAGGNMAD
HTKNCCTTATWTGG
ChIP-seq
Gerstein et al.(2012)
H1-hESC_SRF_HudsonAlpha
0.929
0.929
SRF
M07983_2.00
Homo sapiens
NNWNNCCAWAWAWGGNVD
HBNCCWTWTWTGGNNWNN
ChIP-seq
Gerstein et al.(2012)
HepG2_SRF_HudsonAlpha
0.929
0.929
SRF
M07984_2.00
Homo sapiens
GNCCAWATADGGHMANN
NNTKDCCHTATWTGGNC
ChIP-seq
Gerstein et al.(2012)
K562_SRF_HudsonAlpha
0.929
0.929
SRF
M09249_2.00
Homo sapiens
HNWBVCCAWAWAWGGNRR
YYNCCWTWTWTGGBVWND
Misc
Kulakovskiy et al.(2013)
SRF_HUMAN.H11MO.0.A
0.929
0.929
Srf
M09254_2.00
Mus musculus
NWDVCCAWAWAWGGVMR
YKBCCWTWTWTGGBHWN
Misc
Kulakovskiy et al.(2013)
SRF_MOUSE.H11MO.0.A
0.929
0.929
Srf
M09598_2.00
Mus musculus
CCWWATWWGGNH
DNCCWWATWWGG
Misc
Heinz et al.(2010)
PUER-Srf_Sullivan_et_al.
0.929
0.929
SRF
M10947_2.00
Homo sapiens
MNBWCCWTATAWGGGCAT
ATGCCCWTATAWGGWVNK
Transfac
Matys et al.(2006)
V$SRF_01
0.929
0.929
SRF
M10948_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_02
0.929
0.929
SRF
M10949_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_03
0.929
0.929
SRF
M10950_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_09
0.929
0.929
SRF
M10951_2.00
Homo sapiens
DCCWTATAWGGVSHB
VDSBCCWTATAWGGH
Transfac
Matys et al.(2006)
V$SRF_C
0.929
0.929
SRF
M10952_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q3
0.929
0.929
SRF
M10953_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q4
0.929
0.929
SRF
M10954_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q5_01
0.929
0.929
SRF
M10955_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SRF_Q5_02
0.929
0.929
SRF
M10956_2.00
Homo sapiens
BNCCAWATAWGGVN
NBCCWTATWTGGNV
Transfac
Matys et al.(2006)
V$SRF_Q6
0.929
0.929
SRF
M05554_2.00
Homo sapiens
CCNTAYAWGG
CCWTRTANGG
SELEX
Yin et al.(2017)
SRF_eDBD_Methyl-HT-SELEX
0.929
0.929
bs
M03915_2.00
Drosophila melanogaster
NCCWTATAWGGN
NCCWTATAWGGN
SELEX
Nitta et al.(2015)
bs_1
0.893
0.893
bs
M03916_2.00
Drosophila melanogaster
NCCWTAHAWGGH
DCCWTDTAWGGN
SELEX
Nitta et al.(2015)
bs_2
0.893
0.893
unc-120
M00684_2.00
Caenorhabditis elegans
CHWAWWDGG
CCHWWTWDG
PBM
Narasimhan et al.(2015)
pTH10822
0.821
0.821
MCM1
M01558_2.00
Saccharomyces cerevisiae
YNNWWNNRGN
NCYNNWWNNR
PBM
Zhu et al.(2009)
Mcm1
0.786
0.786
MCM1
M08589_2.00
Saccharomyces cerevisiae
HNHTWCCBDWWHVGGAHDHN
NDHDTCCBDWWHVGGWADND
Misc
DeBoer et al.(2011)
YMR043W_831
0.786
0.786
MCM1
M10990_2.00
Saccharomyces cerevisiae
WNDCCYAAWNNGGWMW
WKWCCNNWTTRGGHNW
Transfac
Matys et al.(2006)
F$MCM1_01
0.786
0.786
MCM1
M10991_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MCM1_02
0.786
0.786
MCM1
M10992_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MCM1_Q6
0.786
0.786
MCM1
M08458_2.00
Saccharomyces cerevisiae
TTCCYRAWNNGG
CCNNWTYRGGAA
COMPILED
Mathelier et al.(2014)
MA0331.1
0.786
0.786
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOARP00000006175
MADS box
15
42
PQAYELSTLTGTQVLLLVASETGHVYTF
Links
Other
MADS box
family TFs
Other
Ovis aries
TFs
131 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL008720
Aedes aegypti
AAEL008720
I
0.893
AAEL010926
Aedes aegypti
AAEL010926
I
0.893
ANCDUO_04431
Ancylostoma duodenale
ANCDUO_04431
I
0.857
H311_03229
Anncaliia algerae
H311_03229
I
0.750
H311_03668
Anncaliia algerae
H311_03668
I
0.750
AALB009948
Anopheles albimanus
AALB009948
I
0.893
AARA006325
Anopheles arabiensis
AARA006325
I
0.893
AATE011966
Anopheles atroparvus
AATE011966
I
0.862
ACHR000964
Anopheles christyi
ACHR000964
I
0.926
ACOM041693
Anopheles coluzzii
ACOM041693
I
0.893
ACUA004576
Anopheles culicifacies
ACUA004576
I
0.893
ADAC008363
Anopheles darlingi
ADAC008363
I
0.926
ADIR000346
Anopheles dirus
ADIR000346
I
0.926
AEPI007010
Anopheles epiroticus
AEPI007010
I
0.893
AFAF013563
Anopheles farauti
AFAF013563
I
0.893
AFUN006147
Anopheles funestus
AFUN006147
I
0.926
AGAP010512
Anopheles gambiae
AGAP010512
I
0.893
AMIN001258
Anopheles minimus
AMIN001258
I
0.893
AQUA001308
Anopheles quadriannulatus
AQUA001308
I
0.893
ASIS007770
Anopheles sinensis
ASIS007770
I
0.926
ASIS013674
Anopheles sinensis
ASIS013674
N
0.893
ASTEI07120
Anopheles stephensi
ASTEI07120
I
0.926
GB47234
Apis mellifera
GB47234
I
0.893
Afo_R000461
Aptenodytes forsteri
Afo_R000461
I
1.000
ACEP12187
Atta cephalotes
ACEP12187
I
0.893
BGIBMGA001384
Bombyx mori
BGIBMGA001384
I
0.862
fgenesh2_pg.scaffold_196000035
Branchiostoma floridae
fgenesh2_pg.scaffold_196000035
I
0.893
fgenesh2_pg.scaffold_8000100
Branchiostoma floridae
fgenesh2_pg.scaffold_8000100
I
0.893
AWRI1499_3592
Brettanomyces bruxellensis
AWRI1499_3592
I
0.793
Brh_R011000
Buceros rhinoceros
Brh_R011000
I
1.000
BXY_0217000
Bursaphelenchus xylophilus
BXY_0217000
I
0.821
CJA08385
Caenorhabditis japonica
CJA08385
I
0.821
Aan_R005414
Calypte anna
Aan_R005414
I
1.000
Cflo_11261--XP_001120126.1_APIME
Camponotus floridanus
Cflo_11261--XP_001120126.1_APIME
I
0.893
SRF
Cavia porcellus
ENSCPOG00000022327
I
1.000
Cmyd_10009988
Chelonia mydas
Cmyd_10009988
I
0.897
CLEC013390
Cimex lectularius
CLEC013390
I
0.893
ENSCSAVG00000008682
Ciona savignyi
ENSCSAVG00000008682
I
0.821
fgenesh1_kg.C_scaffold_2000029
Cochliobolus heterostrophus C5
fgenesh1_kg.C_scaffold_2000029
I
0.793
CFIO01_12657
Colletotrichum fioriniae
CFIO01_12657
I
0.821
GLRG_02553
Colletotrichum graminicola
GLRG_02553
I
0.821
CH063_12904
Colletotrichum higginsianum
CH063_12904
I
0.821
Cob_05053
Colletotrichum orbiculare
Cob_05053
I
0.821
CSUB01_05290
Colletotrichum sublineola
CSUB01_05290
I
0.821
CpipJ_CPIJ008335
Culex pipiens
CpipJ_CPIJ008335
I
0.758
CPIJ008335
Culex quinquefasciatus
CPIJ008335
I
0.758
DACRYDRAFT_57073
Dacryopinax sp
DACRYDRAFT_57073
I
0.857
DAPPUDRAFT_8703
Daphnia pulex
DAPPUDRAFT_8703
I
0.893
srfB
Dictyostelium discoideum
DDB_G0282835
I
0.893
GF11392
Drosophila ananassae
FBgn0088432
I
0.893
GG22961
Drosophila erecta
FBgn0115118
I
0.893
GH20989
Drosophila grimshawi
FBgn0128451
I
0.893
bs
Drosophila melanogaster
FBgn0004101
D
0.893
GI21322
Drosophila mojavensis
FBgn0144052
I
0.893
GL20046
Drosophila persimilis
FBgn0157643
I
0.893
GA17433
Drosophila pseudoobscura
FBgn0077446
I
0.893
GM11854
Drosophila sechellia
FBgn0166795
I
0.893
GD11852
Drosophila simulans
FBgn0183591
I
0.893
GJ21595
Drosophila virilis
FBgn0208714
I
0.893
GK22205
Drosophila willistoni
FBgn0224190
I
0.893
GE14398
Drosophila yakuba
FBgn0232006
I
0.893
SRF
Erinaceus europaeus
ENSEEUG00000005614
I
0.923
ENSFALG00000000878
Ficedula albicollis
ENSFALG00000000878
I
1.000
ENSGMOG00000001540
Gadus morhua
ENSGMOG00000001540
I
1.000
GGTG_11623
Gaeumannomyces graminis
GGTG_11623
I
0.821
Gfo_R009695
Geospiza fortis
Gfo_R009695
I
1.000
GLOTRDRAFT_42980
Gloeophyllum trabeum
GLOTRDRAFT_42980
I
0.857
SRF
Gorilla gorilla
ENSGGOG00000006293
I
1.000
HPLM_0000743501
Haemonchus placei
HPLM_0000743501
I
0.857
HHAL001485-PA
Halyomorpha halys
HHAL001485-PA
I
0.897
Hsal_11632--XP_001120126.1_APIME
Harpegnathos saltator
Hsal_11632--XP_001120126.1_APIME
I
0.893
HMEL017830
Heliconius melpomene
HMEL017830
I
0.893
HelroG137972
Helobdella robusta
HelroG137972
I
0.786
Hba_21368
Heterorhabditis bacteriophora
Hba_21368
I
0.857
ISCW019966
Ixodes scapularis
ISCW019966
I
0.893
SAKL0B11704g
Lachancea kluyveri
SAKL0B11704g
I
0.750
SRF
Loxodonta africana
ENSLAFG00000010278
I
1.000
LCUP011663
Lucilia cuprina
LCUP011663
I
0.862
LLOJ005985
Lutzomyia longipalpis
LLOJ005985
I
0.833
ENSP00000265354
Macaca fascicularis
ENSP00000265354
I
0.933
MGG_02773
Magnaporthe oryzae
MGG_02773
I
0.821
MAPG_02274
Magnaporthe poae
MAPG_02274
I
0.821
MESCA001358
Megaselia scalaris
MESCA001358
I
0.926
MCINX015635
Melitaea cinxia
MCINX015635
I
0.893
MVLG_04297
Microbotryum violaceum
MVLG_04297
I
0.821
DI09_81p70
Microsporidia sp
DI09_81p70
I
0.857
MDOA002443
Musca domestica
MDOA002443
I
0.893
Myotis_brandtii_SRF_10026135
Myotis brandtii
Myotis_brandtii_SRF_10026135
I
0.839
ENSMLUG00000008828
Myotis lucifugus
ENSMLUG00000008828
I
1.000
NV18787
Nasonia vitripennis
NV18787
I
0.893
NCER_102270
Nosema ceranae
NCER_102270
I
0.750
ENSOPRG00000002509
Ochotona princeps
ENSOPRG00000002509
I
1.000
Ogr17973
Ophisaurus gracilis
Ogr17973
I
0.871
PAXRUDRAFT_829045
Paxillus rubicundulus
PAXRUDRAFT_829045
I
0.857
SNOG_07764
Phaeosphaeria nodorum
SNOG_07764
I
0.793
ENSPFOG00000018770
Poecilia formosa
ENSPFOG00000018770
I
0.964
PSEUBRA_SCAF3g03688
Pseudozyma brasiliensis
PSEUBRA_SCAF3g03688
I
0.750
GLOINDRAFT_82941
Rhizophagus irregularis
GLOINDRAFT_82941
I
0.857
RO3G_00948
Rhizopus oryzae
RO3G_00948
I
0.857
RO3G_07165
Rhizopus oryzae
RO3G_07165
I
0.828
O9G_005180
Rozella allomycis
O9G_005180
I
0.964
Sakowv30019106m.g
Saccoglossus kowalevskii
Sakowv30019106m.g
I
0.893
Sjc_0026780
Schistosoma japonicum
Sjc_0026780
I
0.714
SBAD_0000850501
Soboliphyme baturini
SBAD_0000850501
I
0.893
SINV23954
Solenopsis invicta
SINV23954
I
0.963
SRF
Sorex araneus
ENSSARG00000003401
I
0.923
SPPG_06208
Spizellomyces punctatus
SPPG_06208
I
0.929
sr10299
Sporisorium reilianum
sr10299
I
0.786
SLOPH_1335
Spraguea lophii
SLOPH_1335
I
0.750
SNOG_07763
Stagonospora nodorum
SNOG_07763
I
0.793
L596_g5274
Steinernema carpocapsae
L596_g5274
I
0.714
L889_g24087
Steinernema feltiae
L889_g24087
I
0.714
L893_g14743
Steinernema glaseri
L893_g14743
I
0.714
L898_g9834
Steinernema monticolum
L898_g9834
I
0.714
L892_g14520
Steinernema scapterisci
L892_g14520
I
0.714
SMAR003014
Strigamia maritima
SMAR003014
I
0.893
SRF
Taeniopygia guttata
ENSTGUG00000004738
I
1.000
TELCIR_03792
Teladorsagia circumcincta
TELCIR_03792
I
0.857
TELCIR_12851
Teladorsagia circumcincta
TELCIR_12851
I
0.889
THOM_1181
Trachipleistophora hominis
THOM_1181
I
0.714
D917_02561
Trichinella nativa
D917_02561
I
0.893
EFV60876
Trichinella spiralis
EFV60876
I
0.893
TMUE_s0092001100
Trichuris muris
TMUE_s0092001100
I
0.893
D918_07967
Trichuris suis
D918_07967
I
0.893
TTRE_0000468501
Trichuris trichiura
TTRE_0000468501
I
0.893
VCUG_02078
Vavraia culicis
VCUG_02078
I
0.714
VDAG_01770
Verticillium dahliae
VDAG_01770
I
0.821
SRF
Vicugna pacos
ENSVPAG00000008912
I
1.000
J056_002827
Wallemia ichthyophaga
J056_002827
I
0.786
WALSEDRAFT_9958
Wallemia sebi
WALSEDRAFT_9958
I
0.786
L798_08800
Zootermopsis nevadensis
L798_08800
I
0.893