CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AGL85
(
Arabidopsis lyrata
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
fgenesh1_pg.C_scaffold_1002660
T254002_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_1002660
MADS box
16
63
KIEKDEDRLVTLSKRRNGIYTKLSELSILCGAEVAFLGYSCSGKPYTF
Links
Other
MADS box
family TFs
Other
Arabidopsis lyrata
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG01251
Caenorhabditis briggsae
CBG01251
I
CBG22881
Caenorhabditis briggsae
CBG22881
I
CBG22888
Caenorhabditis briggsae
CBG22888
I
CBG23697
Caenorhabditis briggsae
CBG23697
I
CRE11317
Caenorhabditis remanei
CRE11317
I
CRE27862
Caenorhabditis remanei
CRE27862
I