GRMZM5G839969 (Zea mays)
MADS box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00319 (SRF-TF) IPR002100 GRMZM5G839969 T254333_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM5G839969_P01 MADS box 10 55

Links

Other MADS box family TFs
Other Zea mays TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Pavir.Ib03850 Panicum virgatum Pavir.Ib03850 N 0.933
GRMZM5G853066 Zea mays GRMZM5G853066 N 0.917
Si019470m.g Setaria italica Si019470m.g N 0.881
Pavir.J14267 Panicum virgatum Pavir.J14267 N 0.870
GSMUA_Achr3G08500_001 Musa acuminata GSMUA_Achr3G08500_001 N 0.822
GSMUA_Achr2G18400_001 Musa acuminata GSMUA_Achr2G18400_001 N 0.800
Pavir.J40580 Panicum virgatum Pavir.J40580 N 0.800
Pavir.Aa01999 Panicum virgatum Pavir.Aa01999 N 0.783
OBART01G12050 Oryza barthii OBART01G12050 N 0.778
OGLUM01G13490 Oryza glumaepatula OGLUM01G13490 N 0.778
ORGLA01G0101700 Oryza glaberrima ORGLA01G0101700 N 0.778
Pavir.Ab01824 Panicum virgatum Pavir.Ab01824 N 0.778
BGIOSGA003304 Oryza indica BGIOSGA003304 N 0.750
ONIVA01G14280 Oryza nivara ONIVA01G14280 N 0.750
OPUNC01G11730 Oryza punctata OPUNC01G11730 N 0.750
ORUFI01G13020 Oryza rufipogon ORUFI01G13020 N 0.750
OB01G21750 Oryza brachyantha OB01G21750 N 0.745
GSMUA_Achr2G18410_001 Musa acuminata GSMUA_Achr2G18410_001 N 0.742
OB03G33030 Oryza brachyantha OB03G33030 N 0.733
Aquca_007_00647 Aquilegia coerulea Aquca_007_00647 I 0.733
F775_16483 Aegilops tauschii F775_16483 N 0.711
GSMUA_Achr3G24560_001 Musa acuminata GSMUA_Achr3G24560_001 N 0.711
TRAES3BF073700150CFD_g Triticum aestivum TRAES3BF073700150CFD_g N 0.711
Aquca_027_00068 Aquilegia coerulea Aquca_027_00068 I 0.711
Pavir.Eb00487 Panicum virgatum Pavir.Eb00487 N 0.711
GSMUA_AchrUn_randomG17230_001 Musa acuminata GSMUA_AchrUn_randomG17230_001 N 0.708