CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_AchrUn_randomG17230_001
(
Musa acuminata
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
GSMUA_AchrUn_randomG17230_001
T254416_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_AchrUn_randomP17230_001
MADS box
10
58
WIANDSTRRVTFKKRRRGLIKKVSELATLCDVKACLILYGAQEQHPSVW
Links
Other
MADS box
family TFs
Other
Musa acuminata
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr2G18400_001
Musa acuminata
GSMUA_Achr2G18400_001
N
0.771
GSMUA_Achr3G08500_001
Musa acuminata
GSMUA_Achr3G08500_001
N
0.771
GRMZM5G853066
Zea mays
GRMZM5G853066
N
0.750
BGIOSGA003304
Oryza indica
BGIOSGA003304
N
0.729
ONIVA01G14280
Oryza nivara
ONIVA01G14280
N
0.729
OPUNC01G11730
Oryza punctata
OPUNC01G11730
N
0.729
ORUFI01G13020
Oryza rufipogon
ORUFI01G13020
N
0.729
GRMZM5G839969
Zea mays
GRMZM5G839969
N
0.708
OBART01G12050
Oryza barthii
OBART01G12050
N
0.708
OGLUM01G13490
Oryza glumaepatula
OGLUM01G13490
N
0.708
ORGLA01G0101700
Oryza glaberrima
ORGLA01G0101700
N
0.708