CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KNAG_0M02350
(
Kazachstania naganishii
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
KNAG_0M02350
T254497_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARG80
M08426_2.00
Saccharomyces cerevisiae
WGACDC
GHGTCW
ChIP-chip
Mathelier et al.(2014)
MA0271.1
0.854
0.854
ARG80
M08588_2.00
Saccharomyces cerevisiae
NNDVCBNVBDNGRHAR
YTDYCNHVBNVGBHNN
Misc
DeBoer et al.(2011)
YMR042W_1483
0.854
0.854
ARG80
M10989_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ARGRI_01
0.854
0.854
MCM1
M01558_2.00
Saccharomyces cerevisiae
YNNWWNNRGN
NCYNNWWNNR
PBM
Zhu et al.(2009)
Mcm1
0.708
0.708
MCM1
M08589_2.00
Saccharomyces cerevisiae
HNHTWCCBDWWHVGGAHDHN
NDHDTCCBDWWHVGGWADND
Misc
DeBoer et al.(2011)
YMR043W_831
0.708
0.708
MCM1
M10990_2.00
Saccharomyces cerevisiae
WNDCCYAAWNNGGWMW
WKWCCNNWTTRGGHNW
Transfac
Matys et al.(2006)
F$MCM1_01
0.708
0.708
MCM1
M10991_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MCM1_02
0.708
0.708
MCM1
M10992_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MCM1_Q6
0.708
0.708
MCM1
M08458_2.00
Saccharomyces cerevisiae
TTCCYRAWNNGG
CCNNWTYRGGAA
COMPILED
Mathelier et al.(2014)
MA0331.1
0.708
0.708
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCK73088
MADS box
91
138
YLENRTRRQVTFAKRRHGIMKKAYELSVLTGSNILLLILSRSGLVYTF
Links
Other
MADS box
family TFs
Other
Kazachstania naganishii
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NCAS_0A12960
Naumovozyma castellii
NCAS_0A12960
I
0.875
ZYRO0F00748g
Zygosaccharomyces rouxii
ZYRO0F00748g
I
0.875
Scas_Contig709.27
Saccharomyces castellii
Scas_Contig709.27
I
0.875
ARG80
Saccharomyces cerevisiae
YMR042W
D
0.854
16568_YMR042W
Saccharomyces mikatae
16568_YMR042W
I
0.854
17148_YMR042W
Saccharomyces paradoxus
17148_YMR042W
I
0.854
18574_YMR042W
Saccharomyces bayanus
18574_YMR042W
I
0.854
KAFR_0B05290
Kazachstania africana
KAFR_0B05290
I
0.833
NDAI_0B01290
Naumovozyma dairenensis
NDAI_0B01290
I
0.833
TDEL_0B07000
Torulaspora delbrueckii
TDEL_0B07000
I
0.833
ZBAI_03536
Zygosaccharomyces bailii
ZBAI_03536
I
0.833
ZBAI_08534
Zygosaccharomyces bailii
ZBAI_08534
I
0.833
CAGL0F06259g
Candida glabrata
CAGL0F06259g
I
0.812
SNOG_07763
Stagonospora nodorum
SNOG_07763
I
0.759
AWRI1499_3592
Brettanomyces bruxellensis
AWRI1499_3592
I
0.759
SNOG_07764
Phaeosphaeria nodorum
SNOG_07764
I
0.759
fgenesh1_kg.C_scaffold_2000029
Cochliobolus heterostrophus C5
fgenesh1_kg.C_scaffold_2000029
I
0.759
CAGL0I10769g
Candida glabrata
CAGL0I10769g
I
0.729
KAFR_0B05280
Kazachstania africana
KAFR_0B05280
I
0.729
NCAS_0H03140
Naumovozyma castellii
NCAS_0H03140
I
0.729
Scas_Contig649.23
Saccharomyces castellii
Scas_Contig649.23
I
0.729
CAGL0F06237g
Candida glabrata
CAGL0F06237g
I
0.708
KAFR_0A03700
Kazachstania africana
KAFR_0A03700
I
0.708
KNAG_0H00480
Kazachstania naganishii
KNAG_0H00480
I
0.708
Kpol_1073p26
Vanderwaltozyma polyspora
Kpol_1073p26
I
0.708
Kpol_262p3
Vanderwaltozyma polyspora
Kpol_262p3
I
0.708
NCAS_0A12970
Naumovozyma castellii
NCAS_0A12970
I
0.708
NDAI_0B01280
Naumovozyma dairenensis
NDAI_0B01280
I
0.708
NDAI_0C00510
Naumovozyma dairenensis
NDAI_0C00510
I
0.708
SKUD_077902
Saccharomyces kudriavzevii
SKUD_077902
I
0.708
SU7_2521
Saccharomyces arboricola
SU7_2521
I
0.708
TBLA_0B06860
Tetrapisispora blattae
TBLA_0B06860
I
0.708
TBLA_0G01960
Tetrapisispora blattae
TBLA_0G01960
I
0.708
TDEL_0B07010
Torulaspora delbrueckii
TDEL_0B07010
I
0.708
TPHA_0C02530
Tetrapisispora phaffii
TPHA_0C02530
I
0.708
TPHA_0N01520
Tetrapisispora phaffii
TPHA_0N01520
I
0.708
MCM1
Saccharomyces cerevisiae
YMR043W
D
0.708
ZBAI_03537
Zygosaccharomyces bailii
ZBAI_03537
I
0.708
ZBAI_08535
Zygosaccharomyces bailii
ZBAI_08535
I
0.708
ZYRO0F00726g
Zygosaccharomyces rouxii
ZYRO0F00726g
I
0.708
Scas_Contig709.26
Saccharomyces castellii
Scas_Contig709.26
I
0.708
16570_YMR043W
Saccharomyces mikatae
16570_YMR043W
I
0.708
17142_YMR043W
Saccharomyces paradoxus
17142_YMR043W
I
0.708
18568_YMR043W
Saccharomyces bayanus
18568_YMR043W
I
0.708