CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_4g127140
(
Medicago truncatula
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
MTR_4g127140
T254790_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES92226
MADS box
20
67
KVEKESQKQVTFSKRRQGLFRKASELCVLCDVHAAIIVFSPGDKLFCF
Links
Other
MADS box
family TFs
Other
Medicago truncatula
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MTR_2g105290
Medicago truncatula
MTR_2g105290
N
0.917
MTR_8g086290
Medicago truncatula
MTR_8g086290
N
0.854
GLYMA17G01771
Glycine max
GLYMA17G01771
N
0.771
GLYMA20G27361
Glycine max
GLYMA20G27361
N
0.771
MTR_4g036915
Medicago truncatula
MTR_4g036915
I
0.771
MTR_7g028448
Medicago truncatula
MTR_7g028448
I
0.771
Ca_04658
Cicer arietinum
Ca_04658
N
0.771
Ca_18845
Cicer arietinum
Ca_18845
N
0.771
Cucsa.342610
Cucumis sativus
Cucsa.342610
N
0.750
Cla010744
Citrullus lanatus
Cla010744
N
0.729
Bra026764
Brassica rapa
Bra026764
N
0.708
PRUPE_ppa017246mg
Prunus persica
PRUPE_ppa017246mg
N
0.708
PRUPE_ppa026089mg
Prunus persica
PRUPE_ppa026089mg
N
0.708
TCM_006325
Theobroma cacao
TCM_006325
N
0.708
VIT_03s0088g00600
Vitis vinifera
VIT_03s0088g00600
N
0.708
Pm021018
Prunus mume
Pm021018
N
0.708
Pm021070
Prunus mume
Pm021070
N
0.708
cassava33542.m1
Manihot esculenta
cassava33542.m1
N
0.708
Gorai.002G213500
Gossypium raimondii
Gorai.002G213500
N
0.708
Lus10012449.g
Linum usitatissimum
Lus10012449.g
N
0.708
Lus10020511.g
Linum usitatissimum
Lus10020511.g
N
0.708
chr1.CM0088.830.nc
Lotus japonicus
chr1.CM0088.830.nc
N
0.708
chr5.LjT25B19.200.nd
Lotus japonicus
chr5.LjT25B19.200.nd
N
0.708
LjSGA_100222.1
Lotus japonicus
LjSGA_100222.1
N
0.708