CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB03G33030
(
Oryza brachyantha
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OB03G33030
T254898_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB03G33030.1
MADS box
10
54
RIANDAQRRATFRKRLKGLSKKASELATLCSVDACLVVYGEGEAE
Links
Other
MADS box
family TFs
Other
Oryza brachyantha
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OMERI08G12590
Oryza meridionalis
OMERI08G12590
N
0.761
Pavir.J14267
Panicum virgatum
Pavir.J14267
N
0.717
Pavir.Ib03850
Panicum virgatum
Pavir.Ib03850
N
0.711
Si019470m.g
Setaria italica
Si019470m.g
N
0.762
ORUFI03G24940
Oryza rufipogon
ORUFI03G24940
N
0.702
ORUFI01G13020
Oryza rufipogon
ORUFI01G13020
N
0.750
ORGLA03G0226500
Oryza glaberrima
ORGLA03G0226500
N
0.723
ORGLA01G0101700
Oryza glaberrima
ORGLA01G0101700
N
0.729
OPUNC08G12800
Oryza punctata
OPUNC08G12800
N
0.717
OPUNC03G22520
Oryza punctata
OPUNC03G22520
N
0.723
OPUNC01G11730
Oryza punctata
OPUNC01G11730
N
0.750
ONIVA08G16460
Oryza nivara
ONIVA08G16460
N
0.739
ONIVA03G25700
Oryza nivara
ONIVA03G25700
N
0.723
ONIVA01G14280
Oryza nivara
ONIVA01G14280
N
0.750
BGIOSGA003304
Oryza indica
BGIOSGA003304
N
0.750
OMERI03G22160
Oryza meridionalis
OMERI03G22160
N
0.723
OGLUM08G16100
Oryza glumaepatula
OGLUM08G16100
N
0.761
OGLUM03G25150
Oryza glumaepatula
OGLUM03G25150
N
0.723
OGLUM01G13490
Oryza glumaepatula
OGLUM01G13490
N
0.729
OBART08G15340
Oryza barthii
OBART08G15340
N
0.717
OBART03G24330
Oryza barthii
OBART03G24330
N
0.723
OBART01G12050
Oryza barthii
OBART01G12050
N
0.729
OB01G21750
Oryza brachyantha
OB01G21750
N
0.745
LPERR02G10770
Leersia perrieri
LPERR02G10770
N
0.761
LPERR02G10620
Leersia perrieri
LPERR02G10620
N
0.739
LPERR02G10380
Leersia perrieri
LPERR02G10380
N
0.733
GRMZM5G853066
Zea mays
GRMZM5G853066
N
0.708
GRMZM5G839969
Zea mays
GRMZM5G839969
N
0.733