CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OB06G21000
(
Oryza brachyantha
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
OB06G21000
T254913_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OB06G21000.1
MADS box
19
66
RIKKTDARDVCFSKRRQGLFNKAGEISLLCNADVAVVTLSRDGKGFSY
Links
Other
MADS box
family TFs
Other
Oryza brachyantha
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OB06G21020
Oryza brachyantha
OB06G21020
N
0.792
BGIOSGA018341
Oryza indica
BGIOSGA018341
N
0.729
OBART05G10760
Oryza barthii
OBART05G10760
N
0.729
OGLUM05G11150
Oryza glumaepatula
OGLUM05G11150
N
0.729
OMERI05G09060
Oryza meridionalis
OMERI05G09060
N
0.729
ONIVA05G11160
Oryza nivara
ONIVA05G11160
N
0.729
ORGLA05G0093200
Oryza glaberrima
ORGLA05G0093200
N
0.729
ORUFI05G11630
Oryza rufipogon
ORUFI05G11630
N
0.729
LPERR05G08450
Leersia perrieri
LPERR05G08450
N
0.708